Difference between revisions of "Sporulation"

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(→‎Newly identified sporulation proteins (based on transcription profiling))
(→‎Newly identified sporulation proteins (based on transcription profiling))
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=== Newly identified sporulation proteins (based on transcription profiling) ===
 
=== Newly identified sporulation proteins (based on transcription profiling) ===
 +
* ''[[araL]]''
 +
* ''[[araM]]''
 +
* ''[[citA]]''
 
* ''[[citH]]''
 
* ''[[citH]]''
 +
* ''[[lpiD]]''
 +
* ''[[xpaC]]''
 
* ''[[yaaC]]''
 
* ''[[yaaC]]''
 
* ''[[yabS]]''
 
* ''[[yabS]]''
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* ''[[ycgI]]''
 
* ''[[ycgI]]''
 
* ''[[ycgL]]''
 
* ''[[ycgL]]''
−
 
+
* ''[[yerA]]''
 
* ''[[yetF]]''
 
* ''[[yetF]]''
 +
* ''[[yfhM]]''
 
* ''[[yfhS]]''
 
* ''[[yfhS]]''
 
* ''[[yflJ]]''
 
* ''[[yflJ]]''
 
* ''[[yflN]]''
 
* ''[[yflN]]''
 
* ''[[yfmA]]''
 
* ''[[yfmA]]''
 +
* ''[[ygaK]]''
 +
* ''[[yhaR]]''
 
* ''[[yhbB]]''
 
* ''[[yhbB]]''
−
* ''[[yhcT]]
+
* ''[[yhcT]]''
 +
* ''[[yhcW]]''
 
* ''[[yhdB]]''
 
* ''[[yhdB]]''
 
* ''[[yhdC]]''
 
* ''[[yhdC]]''
 +
* ''[[yhdF]]''
 
* ''[[yheF]]''
 
* ''[[yheF]]''
 
* ''[[yhfA]]''
 
* ''[[yhfA]]''
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* ''[[ykoP]]''  
 
* ''[[ykoP]]''  
 
* ''[[ykoQ]]''
 
* ''[[ykoQ]]''
−
* ''[[ykoS]]''  
+
* ''[[ykoS]]''
 +
* ''[[ykoT]]''  
 
* ''[[ykoY]]''
 
* ''[[ykoY]]''
 
* ''[[ykpC]]''
 
* ''[[ykpC]]''
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* ''[[ykzE]]''  
 
* ''[[ykzE]]''  
 
* ''[[ykzH]]''
 
* ''[[ykzH]]''
 +
* ''[[ylaK]]''
 +
* ''[[ylxY]]''
 
* ''[[ymaF]]''
 
* ''[[ymaF]]''
 +
* ''[[ymfH]]''
 +
* ''[[ymfI]]'' 
 
* ''[[ymfJ]]''
 
* ''[[ymfJ]]''
 
* ''[[yndM]]''
 
* ''[[yndM]]''
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* ''[[yngK]]''
 
* ''[[yngK]]''
 
* ''[[yngL]]''  
 
* ''[[yngL]]''  
−
 
 
* ''[[ynzE]]''
 
* ''[[ynzE]]''
 +
* ''[[yoaI]]''
 
* ''[[yoaM]]''
 
* ''[[yoaM]]''
 
* ''[[yoaQ]]''
 
* ''[[yoaQ]]''
 +
* ''[[yobN]]''
 
* ''[[yodL]]''
 
* ''[[yodL]]''
 
* ''[[yodN]]''
 
* ''[[yodN]]''
 
* ''[[yojB]]''
 
* ''[[yojB]]''
 +
* ''[[yotE]]''
 +
* ''[[yotG]]''
 
* ''[[yozD]]''  
 
* ''[[yozD]]''  
 
* ''[[yozE]]''  
 
* ''[[yozE]]''  
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* ''[[yptA]]''
 
* ''[[yptA]]''
 
* ''[[ypzC]]''
 
* ''[[ypzC]]''
 +
* ''[[yqeC]]''
 
* ''[[yqfT]]''
 
* ''[[yqfT]]''
 
* ''[[yqgE]]''
 
* ''[[yqgE]]''
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* ''[[yqjB]]''
 
* ''[[yqjB]]''
 
* ''[[yqjC]]''
 
* ''[[yqjC]]''
 +
* ''[[yrbE]]''
 
* ''[[yrbG]]''
 
* ''[[yrbG]]''
 +
* ''[[yrdN]]''
 
* ''[[yrrI]]''
 
* ''[[yrrI]]''
 +
* ''[[yrrT]]''
 
* ''[[yrzA]]''
 
* ''[[yrzA]]''
 
* ''[[yrzE]]''
 
* ''[[yrzE]]''
 
* ''[[yrzK]]''  
 
* ''[[yrzK]]''  
−
 
+
* ''[[ysnE]]''
 +
* ''[[ytcA]]''
 +
* ''[[ytcB]]''
 +
* ''[[ytdA]]''
 
* ''[[yteT]]''
 
* ''[[yteT]]''
 
* ''[[ytvB]]''
 
* ''[[ytvB]]''
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* ''[[ytzC]]''
 
* ''[[ytzC]]''
 
* ''[[ytzH]]''
 
* ''[[ytzH]]''
 +
* ''[[yubC]]''
 
* ''[[yueG]]''
 
* ''[[yueG]]''
 
* ''[[yufS]]''
 
* ''[[yufS]]''
 +
* ''[[yugF]]''
 
* ''[[yumB]]''  
 
* ''[[yumB]]''  
 
* ''[[yunC]]''
 
* ''[[yunC]]''
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* ''[[yuzF]]''
 
* ''[[yuzF]]''
 
* ''[[yvaC]]''
 
* ''[[yvaC]]''
 +
* ''[[yvaG]]''
 +
* ''[[yvaK]]''
 +
* ''[[yvaM]]''
 +
* ''[[yvdA]]''
 
* ''[[ywaF]]''  
 
* ''[[ywaF]]''  
 
* ''[[ywbB]]''
 
* ''[[ywbB]]''
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* ''[[ywnG]]''
 
* ''[[ywnG]]''
 
* ''[[ywoC]]''
 
* ''[[ywoC]]''
 +
* ''[[yxbA]]''
 
* ''[[yyaL]]''
 
* ''[[yyaL]]''
 
* ''[[yybP]]''
 
* ''[[yybP]]''
 +
* ''[[yycN]]''
 
* ''[[yycO]]''  
 
* ''[[yycO]]''  
 
* ''[[yycP]]''  
 
* ''[[yycP]]''  

Revision as of 08:39, 13 May 2013

Parent categories
Neighbouring categories
Related categories

Genes in this functional category

Spore coat proteins

Class I

  • these proteins completly cover the membrane around the forespore
  • early localizing spore coat proteins

Class II

  • these proteins localize simultaneously with the class I proteins but begin to encase the spore only after engulfment is complete
  • early localizing spore coat proteins

Class III

  • these proteins localize simultaneously with the class I and class II proteins but start to encase the spore only after the appearance of phase dark spores (hr 4.5)
  • early localizing spore coat proteins

Class IV

  • late localizing spore coat proteins (only after completion of engulfment)
  • intermediate between classes III and V

Class V

  • late localizing spore coat proteins (only after completion of engulfment)
  • localize exclusively to phase dark spores
  • localize simultaneously to both poles of the spore

Class VI

  • late localizing spore coat proteins (only after completion of engulfment)
  • most delayed initial localization
  • localize excluseively to phase bright spores

Important publications on the spore coat

Additional publications: PubMed


Spore coat protein/ based on similarity

Small acid-soluble spore proteins

Sporulation proteins/ other

Newly identified sporulation proteins (based on transcription profiling)

Important reviews

Additional reviews: PubMed

Douglas Higgins, Jonathan Dworkin
Recent progress in Bacillus subtilis sporulation.
FEMS Microbiol Rev: 2012, 36(1);131-48
[PubMed:22091839] [WorldCat.org] [DOI] (I p)

Michiel J L de Hoon, Patrick Eichenberger, Dennis Vitkup
Hierarchical evolution of the bacterial sporulation network.
Curr Biol: 2010, 20(17);R735-45
[PubMed:20833318] [WorldCat.org] [DOI] (I p)

Imrich Barák, Anthony J Wilkinson
Where asymmetry in gene expression originates.
Mol Microbiol: 2005, 57(3);611-20
[PubMed:16045607] [WorldCat.org] [DOI] (P p)

Michael D Yudkin, Joanna Clarkson
Differential gene expression in genetically identical sister cells: the initiation of sporulation in Bacillus subtilis.
Mol Microbiol: 2005, 56(3);578-89
[PubMed:15819616] [WorldCat.org] [DOI] (P p)

Imrich Barák, Ezio Ricca, Simon M Cutting
From fundamental studies of sporulation to applied spore research.
Mol Microbiol: 2005, 55(2);330-8
[PubMed:15659154] [WorldCat.org] [DOI] (P p)

Patrick J Piggot, David W Hilbert
Sporulation of Bacillus subtilis.
Curr Opin Microbiol: 2004, 7(6);579-86
[PubMed:15556029] [WorldCat.org] [DOI] (P p)

David W Hilbert, Patrick J Piggot
Compartmentalization of gene expression during Bacillus subtilis spore formation.
Microbiol Mol Biol Rev: 2004, 68(2);234-62
[PubMed:15187183] [WorldCat.org] [DOI] (P p)

Jeff Errington
Regulation of endospore formation in Bacillus subtilis.
Nat Rev Microbiol: 2003, 1(2);117-26
[PubMed:15035041] [WorldCat.org] [DOI] (P p)

R R Freedman
Raynaud's phenomenon, lack of neurological influence.
Br J Rheumatol: 1990, 29(6);492-3
[PubMed:2257467] [WorldCat.org] [DOI] (P p)


Important original publications

Jordi van Gestel, Martin A Nowak, Corina E Tarnita
The evolution of cell-to-cell communication in a sporulating bacterium.
PLoS Comput Biol: 2012, 8(12);e1002818
[PubMed:23284278] [WorldCat.org] [DOI] (I p)

Wishwas Abhyankar, Alex Ter Beek, Henk Dekker, Remco Kort, Stanley Brul, Chris G de Koster
Gel-free proteomic identification of the Bacillus subtilis insoluble spore coat protein fraction.
Proteomics: 2011, 11(23);4541-50
[PubMed:21905219] [WorldCat.org] [DOI] (I p)

Langyong Mao, Shantong Jiang, Bin Wang, Liang Chen, Qin Yao, Keping Chen
Protein profile of Bacillus subtilis spore.
Curr Microbiol: 2011, 63(2);198-205
[PubMed:21667307] [WorldCat.org] [DOI] (I p)

Daisuke Imamura, Ritsuko Kuwana, Hiromu Takamatsu, Kazuhito Watabe
Proteins involved in formation of the outermost layer of Bacillus subtilis spores.
J Bacteriol: 2011, 193(16);4075-80
[PubMed:21665972] [WorldCat.org] [DOI] (I p)


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