Difference between revisions of "CcpA regulon"
(→Repression) |
|||
| (23 intermediate revisions by the same user not shown) | |||
| Line 7: | Line 7: | ||
=== Activation === | === Activation === | ||
* ''[[ackA]]'' | * ''[[ackA]]'' | ||
| − | * ''[[ | + | * ''[[degU]]'' |
| − | * ''[[ | + | * ''[[ilvB]]-[[ilvH]]-[[ilvC]]-[[leuA]]-[[leuB]]-[[leuC]]-[[leuD]]'' |
| − | + | * ''[[opuE]]'' | |
| − | |||
| − | |||
| − | |||
| − | * ''[[ | ||
* ''[[pta]]'' | * ''[[pta]]'' | ||
=== Repression === | === Repression === | ||
| − | * ''[[abbA]]'' | + | * ''[[abbA]]-[[ykuL]]-[[ccpC]]'' |
| − | * ''[[ | + | * ''[[abf2]]'' |
| + | * ''[[abnA]]'' | ||
* ''[[abn2]]'' | * ''[[abn2]]'' | ||
| − | * ''[[acoA]] | + | * ''[[acoA]]-[[acoB]]-[[acoC]]-[[acoL]]'' |
| − | + | * ''[[acoR]]-[[sspH]]'' | |
| − | |||
| − | |||
| − | * ''[[acoR]]'' | ||
* ''[[acsA]]'' | * ''[[acsA]]'' | ||
| − | * ''[[acuA]] | + | * ''[[acuA]]-[[acuB]]-[[acuC]]'' |
| − | |||
| − | |||
* ''[[amyE]]'' | * ''[[amyE]]'' | ||
| − | * ''[[araA]] | + | * ''[[araA]]-[[araB]]-[[araD]]-[[araL]]-[[araM]]-[[araN]]-[[araP]]-[[araQ]]-[[abfA]]'' |
| − | |||
| − | |||
* ''[[araE]]'' | * ''[[araE]]'' | ||
| − | * ''[[ | + | * ''[[bglP]]-[[bglH]]-[[yxiE]]'' |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
* ''[[bglS]]'' | * ''[[bglS]]'' | ||
* ''[[cccA]]'' | * ''[[cccA]]'' | ||
| − | |||
* ''[[cimH]]'' | * ''[[cimH]]'' | ||
| − | * ''[[citM]]'' | + | * ''[[citB]]'' |
| − | * ''[[citZ]]'' | + | * ''[[citM]]-[[yflN]]'' |
| + | * ''[[citZ]]-[[icd]]-[[mdh]]'' | ||
| + | * ''[[csbX]]'' | ||
* ''[[cstA]]'' | * ''[[cstA]]'' | ||
* ''[[ctaC]]'' | * ''[[ctaC]]'' | ||
* ''[[cwlS]]'' | * ''[[cwlS]]'' | ||
| − | * ''[[cydA]] | + | * ''[[cydA]]-[[cydB]]-[[cydC]]-[[cydD]]'' |
| − | |||
| − | |||
| − | |||
* ''[[dctP]]'' | * ''[[dctP]]'' | ||
| − | * ''[[dra]] | + | * ''[[dra]]-[[nupC]]-[[pdp]]'' |
| − | |||
| − | |||
* ''[[fadB]]'' | * ''[[fadB]]'' | ||
| − | * ''[[ | + | * ''[[fadN]]-[[fadA]]-[[fadE]]'' |
| − | * ''[[galT]]'' | + | * ''[[galK]]-[[galT]]'' |
* ''[[glpD]]'' | * ''[[glpD]]'' | ||
| − | * ''[[glpF]] | + | * ''[[glpF]]-[[glpK]]'' |
| − | + | * ''[[glpT]][[glpQ]]'' | |
| − | * ''[[ | + | * ''[[gmuB]]-[[gmuA]]-[[gmuC]]-[[gmuD]]-[[gmuR]]-[[gmuE]]-[[gmuF]]-[[gmuG]]'' |
| − | + | * ''[[gntR]]-[[gntK]]-[[gntP]]-[[gntZ]]'' | |
| − | * ''[[ | + | * ''[[hbuT]]-[[scoA]]-[[scoB]]-[[yxjF]]'' |
| − | + | * ''[[hutP]]-[[hutH]]-[[hutU]]-[[hutI]]-[[hutG]]-[[hutM]]'' | |
| − | + | * ''[[iolA]]-[[iolB]]-[[iolC]]-[[iolD]]-[[iolE]]-[[iolF]]-[[iolG]]-[[iolH]]-[[iolI]]-[[iolJ]]'' | |
| − | + | * ''[[kdgR]]-[[kdgK]]-[[kdgA]]-[[kdgT]]'' | |
| − | + | * ''[[kduI]]-[[kduD]]'' | |
| − | + | * ''[[lcfA]]-[[fadR]]-[[fadB]]-[[etfB]]-[[etfA]]'' | |
| − | + | * ''[[lcfB]]'' | |
| − | |||
| − | * ''[[ | ||
| − | |||
| − | |||
| − | |||
| − | * ''[[ | ||
| − | |||
| − | |||
| − | |||
| − | * ''[[ | ||
| − | |||
| − | |||
| − | |||
| − | * ''[[iolA]] | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | * ''[[ | ||
| − | |||
| − | |||
| − | |||
| − | * ''[[kduD]]'' | ||
| − | * ''[[ | ||
| − | * ''[[ | ||
* ''[[ldt]]'' | * ''[[ldt]]'' | ||
| − | * ''[[levD]] | + | * ''[[levD]]-[[levE]]-[[levF]]-[[levG]]-[[sacC]]'' |
| − | + | * ''[[licB]]-[[licC]]-[[licA]]-[[licH]]'' | |
| − | + | * ''[[malA]]-[[glvR]]-[[malP]]'' | |
| − | + | * ''[[manR]]'' | |
| − | + | * ''[[mleN]]-[[mleA]]'' | |
| − | * ''[[licB]] | + | * ''[[mmgA]]-[[mmgB]]-[[mmgC]]-[[mmgD]]-[[mmgE]]-[[yqiQ]]'' |
| − | + | * ''[[msmR]]-[[msmE]]-[[amyD]]-[[amyC]]-[[melA]]'' | |
| − | + | * ''[[yxkF]]-[[msmX]]'' | |
| − | * ''[[malA]]'' | + | * ''[[mtlR]]'' |
| − | * ''[[ | ||
| − | * ''[[ | ||
| − | * ''[[mmgA]] | ||
| − | |||
| − | |||
| − | * ''[[ | ||
| − | * ''[[ | ||
| − | * ''[[ | ||
* ''[[nagA]]'' | * ''[[nagA]]'' | ||
| − | + | * ''[[odhA]]-[[odhB]]'' | |
| − | * ''[[odhA]] | ||
| − | |||
| − | |||
* ''[[pel]]'' | * ''[[pel]]'' | ||
| − | * ''[[phoP]] | + | * ''[[phoP]]-[[phoR]]'' |
| − | |||
* ''[[phrC]]'' | * ''[[phrC]]'' | ||
* ''[[phrE]]'' | * ''[[phrE]]'' | ||
| Line 134: | Line 72: | ||
* ''[[qcrA]]'' | * ''[[qcrA]]'' | ||
* ''[[rapF]]'' | * ''[[rapF]]'' | ||
| − | * ''[[ | + | * ''[[rbsR]]-[[rbsK]]-[[rbsD]]-[[rbsA]]-[[rbsC]]-[[rbsB]]'' |
| − | + | * ''[[refZ]]'' | |
| − | + | * ''[[resA]]-[[resB]]-[[resC]]-[[resD]]-[[resE]]'' | |
| − | + | * ''[[rhaEW]]-[[rhaR]]-[[rhaB]]-[[rhaM]]-[[rhaA]]'' | |
| − | |||
| − | * ''[[ | ||
| − | * ''[[resA]] | ||
| − | |||
| − | |||
| − | |||
| − | * ''[[ | ||
* ''[[rocG]]'' | * ''[[rocG]]'' | ||
| − | * ''[[rsbV]] | + | * ''[[rsbV]]-[[rsbW]]-[[sigB]]-[[rsbX]]'' |
| − | + | * ''[[sacP]]-[[sacA]]-[[ywdA]]'' | |
| − | + | ||
| − | |||
| − | |||
| − | * ''[[sacP]] | ||
| − | |||
| − | |||
| − | |||
* ''[[sigL]]'' | * ''[[sigL]]'' | ||
| − | * ''[[ | + | * ''[[sucC]]-[[sucD]]'' |
| − | + | * ''[[treP]]-[[treA]]-[[treR]]'' | |
| − | * ''[[ | + | * ''[[uxaC]]-[[yjmB]]-[[yjmC]]-[[yjmD]]-[[uxuA]]-[[yjmF]]-[[exuT]]-[[exuR]]-[[uxaB]]-[[uxaA]]'' |
| − | + | * ''[[wprA]]'' | |
| − | * ''[[ | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | * ''[[ | ||
* ''[[xylA]]'' | * ''[[xylA]]'' | ||
* ''[[xylB]]'' | * ''[[xylB]]'' | ||
| Line 172: | Line 91: | ||
* ''[[yesM]]'' | * ''[[yesM]]'' | ||
* ''[[yfkN]]'' | * ''[[yfkN]]'' | ||
| − | |||
* ''[[yhaR]]'' | * ''[[yhaR]]'' | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
* ''[[ylbP]]'' | * ''[[ylbP]]'' | ||
* ''[[yobO]]'' | * ''[[yobO]]'' | ||
| Line 184: | Line 97: | ||
* ''[[yozM]]'' | * ''[[yozM]]'' | ||
* ''[[ypiF]]'' | * ''[[ypiF]]'' | ||
| − | |||
* ''[[yqxI]]'' | * ''[[yqxI]]'' | ||
| − | |||
* ''[[yvcI]]'' | * ''[[yvcI]]'' | ||
* ''[[yvmB]]'' | * ''[[yvmB]]'' | ||
* ''[[yvnA]]'' | * ''[[yvnA]]'' | ||
| − | + | ||
| − | |||
| − | |||
| − | |||
| − | |||
= Important publications on the [[CcpA]] regulon = | = Important publications on the [[CcpA]] regulon = | ||
| − | <pubmed>12850135 ,11251851,10559165, 11160890,17183215 | + | <pubmed>12850135 ,11251851,10559165, 11160890,17183215 22383848 22900538 26483775</pubmed> |
| + | |||
| + | =Back to [[regulons]]= | ||
Latest revision as of 13:29, 4 January 2016
| Regulator | |
Contents
Genes in this regulon
Activation
Repression
- abbA-ykuL-ccpC
- abf2
- abnA
- abn2
- acoA-acoB-acoC-acoL
- acoR-sspH
- acsA
- acuA-acuB-acuC
- amyE
- araA-araB-araD-araL-araM-araN-araP-araQ-abfA
- araE
- bglP-bglH-yxiE
- bglS
- cccA
- cimH
- citB
- citM-yflN
- citZ-icd-mdh
- csbX
- cstA
- ctaC
- cwlS
- cydA-cydB-cydC-cydD
- dctP
- dra-nupC-pdp
- fadB
- fadN-fadA-fadE
- galK-galT
- glpD
- glpF-glpK
- glpTglpQ
- gmuB-gmuA-gmuC-gmuD-gmuR-gmuE-gmuF-gmuG
- gntR-gntK-gntP-gntZ
- hbuT-scoA-scoB-yxjF
- hutP-hutH-hutU-hutI-hutG-hutM
- iolA-iolB-iolC-iolD-iolE-iolF-iolG-iolH-iolI-iolJ
- kdgR-kdgK-kdgA-kdgT
- kduI-kduD
- lcfA-fadR-fadB-etfB-etfA
- lcfB
- ldt
- levD-levE-levF-levG-sacC
- licB-licC-licA-licH
- malA-glvR-malP
- manR
- mleN-mleA
- mmgA-mmgB-mmgC-mmgD-mmgE-yqiQ
- msmR-msmE-amyD-amyC-melA
- yxkF-msmX
- mtlR
- nagA
- odhA-odhB
- pel
- phoP-phoR
- phrC
- phrE
- phrG
- qcrA
- rapF
- rbsR-rbsK-rbsD-rbsA-rbsC-rbsB
- refZ
- resA-resB-resC-resD-resE
- rhaEW-rhaR-rhaB-rhaM-rhaA
- rocG
- rsbV-rsbW-sigB-rsbX
- sacP-sacA-ywdA
- sigL
- sucC-sucD
- treP-treA-treR
- uxaC-yjmB-yjmC-yjmD-uxuA-yjmF-exuT-exuR-uxaB-uxaA
- wprA
- xylA
- xylB
- xynB
- xynP
- yesM
- yfkN
- yhaR
- ylbP
- yobO
- yopL
- yozM
- ypiF
- yqxI
- yvcI
- yvmB
- yvnA
Important publications on the CcpA regulon
