Difference between revisions of "Phosphoproteins"

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(→‎Phosphorylation on an Arg residue)
(→‎Phosphorylation on an Arg residue)
 
(27 intermediate revisions by the same user not shown)
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* 6.10. [[Pseudogenes]]
 
* 6.10. [[Pseudogenes]]
 
|Related=
 
|Related=
−
none
+
* [[protein kinases and phosphatases]]
 +
* [[two-component systems]]
 +
* [[PTS]]
 +
* [[PRD-containing transcription factors]]
 +
* [[phosphorelay]]
 +
* [[response regulator aspartate phosphatases]]
 
|}}
 
|}}
  
Line 25: Line 30:
 
==Phosphoproteins in ''B. subtilis''==
 
==Phosphoproteins in ''B. subtilis''==
 
===Phosphorylation on an Arg residue===
 
===Phosphorylation on an Arg residue===
−
* [[CtsR]], phosphorylated by [[McsB]]
+
* [[CtsR]] (R55), phosphorylated by [[McsB]]
 
* [[AccD]]
 
* [[AccD]]
 
* [[AhpF]]
 
* [[AhpF]]
 
* [[AlaR]]
 
* [[AlaR]]
 +
* [[AlbF]] (R17)
 
* [[Apt]]
 
* [[Apt]]
 
* [[ArgG]]
 
* [[ArgG]]
Line 35: Line 41:
 
* [[AtpH]]
 
* [[AtpH]]
 
* [[BdhA]]
 
* [[BdhA]]
 +
* [[BfmBAB]] (R23)
 
* [[ClpC]]
 
* [[ClpC]]
 
* [[ClpP]]
 
* [[ClpP]]
Line 41: Line 48:
 
* [[ComGA]]
 
* [[ComGA]]
 
* [[ComK]]
 
* [[ComK]]
−
 
+
* [[CsoR]] (R24)
 
* [[DivIVA]]
 
* [[DivIVA]]
 
* [[FadB]]
 
* [[FadB]]
 
* [[FliY]]
 
* [[FliY]]
 +
* [[FlgN]]
 
* [[FrlB]]
 
* [[FrlB]]
 +
* [[GanA]]
 
* [[GapA]]
 
* [[GapA]]
 
* [[GatC]]
 
* [[GatC]]
Line 56: Line 65:
 
* [[Hbs]]
 
* [[Hbs]]
 
* [[HemB]]
 
* [[HemB]]
 +
* [[Hpf]]
 +
* [[HrcA]]
 
* [[Icd]]
 
* [[Icd]]
 
* [[IlvB]]
 
* [[IlvB]]
 
* [[IlvC]]
 
* [[IlvC]]
 +
* [[IolE]] (R216)
 
* [[KatA]]
 
* [[KatA]]
−
* [[LacA]]
+
* [[Kre]] (R26)
 
* [[LeuB]]
 
* [[LeuB]]
 
* [[LeuC]]
 
* [[LeuC]]
Line 67: Line 79:
 
* [[McsA]]
 
* [[McsA]]
 
* [[Mdh]]
 
* [[Mdh]]
 +
* [[MelA]] (R56)
 
* [[MenB]]
 
* [[MenB]]
 +
* [[MntB]] (R132)
 
* [[MtnA]]
 
* [[MtnA]]
  
Line 74: Line 88:
 
* [[Nin]]
 
* [[Nin]]
 
* [[OdhA]]
 
* [[OdhA]]
 +
* [[OdhB]] (R300)
 
* [[OxdC]]
 
* [[OxdC]]
 
* [[PdxS]]
 
* [[PdxS]]
Line 81: Line 96:
 
* [[RecA]]
 
* [[RecA]]
 
* [[RplK]]
 
* [[RplK]]
−
* [[RplN]]
+
* [[RplN]] (R17)
 +
* [[RplV]] (R11)
 
* [[RplW]]
 
* [[RplW]]
 +
* [[RpmEB]]
 
* [[RpmGA]]
 
* [[RpmGA]]
 
* [[RpoB]]
 
* [[RpoB]]
 
* [[RpoC]]
 
* [[RpoC]]
 
* [[RpsG]]
 
* [[RpsG]]
−
* [[RpsH]]
+
* [[RpsH]] (R47, R72)
 
* [[RpsI]]
 
* [[RpsI]]
 
* [[RpsL]]
 
* [[RpsL]]
Line 93: Line 110:
 
* [[RpsN]]
 
* [[RpsN]]
 
* [[ScoC]]
 
* [[ScoC]]
 +
* [[SrfAA]] (R226)
 
* [[SrfAB]]
 
* [[SrfAB]]
 
* [[SsbA]]
 
* [[SsbA]]
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* [[ThyB]]
 
* [[ThyB]]
 
* [[Tig]]
 
* [[Tig]]
 +
* [[TufA]] (R384)
 
* [[YceE]]
 
* [[YceE]]
 
* [[YciC]]
 
* [[YciC]]
 
* [[YdcI]]
 
* [[YdcI]]
 
* [[YdjO]]
 
* [[YdjO]]
 +
* [[YerA]] (R14)
 
* [[YfmG]]
 
* [[YfmG]]
 
* [[YheA]]
 
* [[YheA]]
 +
* [[YkoM]] (R89)
 +
 
* [[YlbN]]
 
* [[YlbN]]
 
* [[YloV]]
 
* [[YloV]]
 +
* [[YpiF]] (R4)
 
* [[YrvO]]
 
* [[YrvO]]
−
* [[YtiA]]
+
 
 
* [[YtxH]]
 
* [[YtxH]]
 +
* [[YvfU]] (R116, R143)
 
* [[YvrO]]
 
* [[YvrO]]
−
* [[YvyD]]
+
 
−
* [[YvyG]]
 
 
* [[YwpJ]]
 
* [[YwpJ]]
  
Line 262: Line 285:
 
* [[CitZ]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]  
 
* [[CitZ]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]  
 
* [[CodY]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[CodY]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 +
* [[CotB]] [http://www.ncbi.nlm.nih.gov/pubmed/27185916 Nguyen ''et al''., 2016]
 +
* [[CotG]] [http://www.ncbi.nlm.nih.gov/pubmed/25115591 Saggese ''et al''., 2014]
 
* [[DegS]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[DegS]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[DhbC]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[DhbC]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
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* [[RecA]] [http://www.ncbi.nlm.nih.gov/pubmed/20509597 Soufi ''et al''., 2010]  
 
* [[RecA]] [http://www.ncbi.nlm.nih.gov/pubmed/20509597 Soufi ''et al''., 2010]  
 
* [[RocF]] [http://www.ncbi.nlm.nih.gov/pubmed/20509597 Soufi ''et al''., 2010]  
 
* [[RocF]] [http://www.ncbi.nlm.nih.gov/pubmed/20509597 Soufi ''et al''., 2010]  
 +
* [[RpsJ]] [http://www.ncbi.nlm.nih.gov/pubmed/26381121 Rosenberg ''et al''., 2015]
 
* [[RsbRC]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[RsbRC]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
  
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* [[SrfAB]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[SrfAB]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[SrfAC]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[SrfAC]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 +
* [[SspA]] [http://www.ncbi.nlm.nih.gov/pubmed/26381121 Rosenberg ''et al''., 2015]
 +
* [[SspB]] [http://www.ncbi.nlm.nih.gov/pubmed/26381121 Rosenberg ''et al''., 2015]
 
* [[SucC]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[SucC]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[TagE]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[TagE]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
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* [[LtaS]]
 
* [[LtaS]]
 
* [[AroA]] [http://www.ncbi.nlm.nih.gov/pubmed/17726680 Eymann''et al''., 2007]  
 
* [[AroA]] [http://www.ncbi.nlm.nih.gov/pubmed/17726680 Eymann''et al''., 2007]  
 +
* [[CotG]] [http://www.ncbi.nlm.nih.gov/pubmed/25115591 Saggese ''et al''., 2014]
 +
* [[CpgA]] [http://www.ncbi.nlm.nih.gov/pubmed/22544754 Pompeo ''et al''., 2012]
 
* [[Drm]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[Drm]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[Eno]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[Eno]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
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* [[FusA]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[FusA]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[GndA]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[GndA]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 +
* [[GpsB]] [http://www.ncbi.nlm.nih.gov/pubmed/25845974 Pompeo ''et al''., 2015]
 
* [[Hbs]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[Hbs]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[Ndk]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[Ndk]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
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* [[SodA]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[SodA]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[TyrZ]] [http://www.ncbi.nlm.nih.gov/pubmed/20509597 Soufi ''et al''., 2010]  
 
* [[TyrZ]] [http://www.ncbi.nlm.nih.gov/pubmed/20509597 Soufi ''et al''., 2010]  
−
* [[YdcC]] [http://www.ncbi.nlm.nih.gov/pubmed/20509597 Soufi ''et al''., 2010]  
+
* [[YdcC]] [http://www.ncbi.nlm.nih.gov/pubmed/20509597 Soufi ''et al''., 2010]
 +
* [[YvcK]] [http://www.ncbi.nlm.nih.gov/pubmed/25012659 Foulquier ''et al''., 2014]
  
 
===Phosphorylation on a Tyr residue===
 
===Phosphorylation on a Tyr residue===
 
* [[AhpF]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]  
 
* [[AhpF]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]  
 
* [[Asd]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[Asd]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 +
* [[FusA|EF-G]] [http://www.ncbi.nlm.nih.gov/pubmed/26381121 Rosenberg ''et al''., 2015]
 +
* [[TufA|EF-Tu]] [http://www.ncbi.nlm.nih.gov/pubmed/26381121 Rosenberg ''et al''., 2015]
 
* [[Eno]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[Eno]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 +
* [[EpsB]] [http://www.ncbi.nlm.nih.gov/pubmed/25085422 Elsholz ''et al''., 2007]
 +
* [[EpsE]] [http://www.ncbi.nlm.nih.gov/pubmed/25085422 Elsholz ''et al''., 2007]
 +
* [[FlgN]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[InfA]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[InfA]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[Ldh]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[Ldh]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
Line 364: Line 401:
 
* [[ThiC]] [http://www.ncbi.nlm.nih.gov/pubmed/20509597 Soufi ''et al''., 2010]  
 
* [[ThiC]] [http://www.ncbi.nlm.nih.gov/pubmed/20509597 Soufi ''et al''., 2010]  
 
* [[TuaD]] [http://www.ncbi.nlm.nih.gov/sites/entrez/12970183 Mijakovic ''et al.'', 2003]
 
* [[TuaD]] [http://www.ncbi.nlm.nih.gov/sites/entrez/12970183 Mijakovic ''et al.'', 2003]
 +
 
* [[Ugd]] [http://www.ncbi.nlm.nih.gov/sites/entrez/12970183 Mijakovic ''et al.'', 2003], [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[Ugd]] [http://www.ncbi.nlm.nih.gov/sites/entrez/12970183 Mijakovic ''et al.'', 2003], [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[YjoA]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[YjoA]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[YnfE]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[YnfE]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[YorK]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[YorK]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
−
* [[YvyG]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
  
 
===Phosphorylation on either a Ser, Thr or Tyr residue===
 
===Phosphorylation on either a Ser, Thr or Tyr residue===
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* [[GlyA]] [http://www.ncbi.nlm.nih.gov/pubmed/16493705 Levine ''et al''., 2007] [http://www.ncbi.nlm.nih.gov/pubmed/17726680 Eymann''et al''., 2007]  
 
* [[GlyA]] [http://www.ncbi.nlm.nih.gov/pubmed/16493705 Levine ''et al''., 2007] [http://www.ncbi.nlm.nih.gov/pubmed/17726680 Eymann''et al''., 2007]  
−
* [[GpsB]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
 
* [[GroEL]] [http://www.ncbi.nlm.nih.gov/pubmed/16493705 Levine ''et al''., 2007] [http://www.ncbi.nlm.nih.gov/pubmed/17726680 Eymann''et al''., 2007]  
 
* [[GroEL]] [http://www.ncbi.nlm.nih.gov/pubmed/16493705 Levine ''et al''., 2007] [http://www.ncbi.nlm.nih.gov/pubmed/17726680 Eymann''et al''., 2007]  
 
* [[GtaB]] [http://www.ncbi.nlm.nih.gov/pubmed/16493705 Levine ''et al''., 2007]
 
* [[GtaB]] [http://www.ncbi.nlm.nih.gov/pubmed/16493705 Levine ''et al''., 2007]
Line 417: Line 453:
 
* [[YtxJ]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[YtxJ]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
 
* [[SufC]] [http://www.ncbi.nlm.nih.gov/pubmed/16493705 Levine ''et al''., 2007]
 
* [[SufC]] [http://www.ncbi.nlm.nih.gov/pubmed/16493705 Levine ''et al''., 2007]
−
* [[YxxG]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
+
* [[WapI]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]
  
 
* [[Zur]] [http://www.ncbi.nlm.nih.gov/pubmed/16493705 Levine ''et al''., 2007]
 
* [[Zur]] [http://www.ncbi.nlm.nih.gov/pubmed/16493705 Levine ''et al''., 2007]
−
 
−
==Related Lists==
 
−
* [[two-component systems]]
 
−
* [[PTS]]
 
−
* [[PRD-containing transcription factors]]
 
−
* [[phosphorelay]]
 
−
* [[response regulator aspartate phosphatases]]
 
−
* [[protein kinases and phosphatases]]
 
  
 
==Original papers on the ''B. subtilis'' phosphoproteome==
 
==Original papers on the ''B. subtilis'' phosphoproteome==
−
<pubmed>17218307 16493705 17726680 20509597 </pubmed>
+
<pubmed>17218307 16493705 17726680 20509597 22517742 24263382 24390483</pubmed>
  
 
==Reviews==
 
==Reviews==

Latest revision as of 11:12, 24 October 2016

These proteins are subject to a phosphorylation event. Most often, protein phosphorylation affects the conformation of the protein resulting in changes in biological activity, interaction properties and/ or localization.

Parent category
Neighbouring categories
Related categories






Phosphoproteins in B. subtilis

Phosphorylation on an Arg residue

Phosphorylation on an Asp residue: Response regulators of two-component systems

Phosphorylation on a Cys residue

  • Enzyme IIB components of the PTS
    • PtsG: glucose permease, EIICBA: phosphorylated by PtsG-IIA domain
    • GamP: glucosamine permease, EIICBA: phosphorylated by GamP-IIA domain
    • MurP: N-acetyl muramic acid-specific phosphotransferase system, EIIBC: likely phosphorylated by PtsG-IIA domain
    • SacP: sucrose permease (high affinity): phosphorylated by PtsG-IIA domain
    • SacX: sucrose permease (low affinity): phosphorylated by PtsG-IIA domain
    • MtlA: mannitol permease: phosphorylated by MtlF
    • GmuB: galactomannan permease: phosphorylated by GmuA
    • TreP: trehalose permease: phosphorylated by PtsG-IIA domain
    • MalP: maltose permease: likely phosphorylated by PtsG-IIA domain
    • FruA: fructose permease: phosphorylated by FruA-IIA domain
    • ManP: mannose permease: phosphorylated by ManP-IIA domain
    • LicB: lichenan permease: phosphorylated by LicA
    • BglP: ß-glucoside permease: phosphorylated by BglP-IIA domain
    • NagP: N-acetylglucosamine permease: phosphorylated by PtsG-IIA domain

Phosphorylation on a His residue

  • PTS proteins
    • Enzyme I: autophosphorylated using phosphoenolpyruvate as phosphate donor
    • HPr: phosphorylated by Enzyme I
    • PtsG: glucose permease, EIICBA: phosphorylated by HPr
    • GamP: glucosamine permease, EIICBA: phosphorylated by HPr
    • MtlF: mannitol permease: phosphorylated by HPr
    • GmuA: galactomannan permease: phosphorylated by HPr
    • MalP: maltose permease: phosphorylated by HPr
    • FruA: fructose permease: phosphorylated by HPr
    • ManP: mannose permease: phosphorylated by HPr
    • LevD: fructose permease: phosphorylated by HPr
    • LevE: fructose permease: phosphorylated by LevD
    • LicA: lichenan permease: phosphorylated by HPr
    • BglP: ß-glucoside permease
    • YpqE: unknown EIIA component: phosphorylated by HPr
    • YyzE: truncated PTS IIA protein: might perhaps be phosphorylated by HPr

Phosphorylation on a Ser residue

Phosphorylation on a Thr residue

Phosphorylation on a Tyr residue

Phosphorylation on either a Ser, Thr or Tyr residue

Original papers on the B. subtilis phosphoproteome


Reviews


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