Difference between revisions of "Transcription factors and their control"
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==Reviews== | ==Reviews== | ||
<pubmed>18599813 </pubmed> | <pubmed>18599813 </pubmed> | ||
+ | |||
+ | == Genes in this functional category == | ||
+ | |||
+ | === Two-component system response regulators === | ||
+ | * ''[[bceR]]'' | ||
+ | * ''[[cheY]]'' | ||
+ | * ''[[citT]]'' | ||
+ | * ''[[comA]]'' | ||
+ | * ''[[cssR]]'' | ||
+ | * ''[[dctR]]'' | ||
+ | * ''[[degU]]'' | ||
+ | * ''[[desR]]'' | ||
+ | * ''[[glnL]]'' | ||
+ | * ''[[liaR]]'' | ||
+ | * ''[[lytT]]'' | ||
+ | * ''[[malR]]'' | ||
+ | * ''[[natR]]'' | ||
+ | * ''[[phoP]]'' | ||
+ | * ''[[psdR]]'' | ||
+ | * ''[[resD]]'' | ||
+ | * ''[[spo0A]]'' | ||
+ | * ''[[walR]]'' | ||
+ | * ''[[ybdJ]]'' | ||
+ | * ''[[ycbL]]'' | ||
+ | * ''[[yclJ]]'' | ||
+ | * ''[[ydfI]]'' | ||
+ | * ''[[yesN]]'' | ||
+ | * ''[[yfiK]]'' | ||
+ | * ''[[yhcZ]]'' | ||
+ | * ''[[ykoG]]'' | ||
+ | * ''[[yneI]]'' | ||
+ | * ''[[yrkP]]'' | ||
+ | * ''[[yvfU]]'' | ||
+ | * ''[[yvrHb]]'' | ||
+ | * ''[[yxdJ]]'' | ||
+ | * ''[[yxjL]]'' | ||
+ | |||
+ | === Prd-type regulators === | ||
+ | * ''[[glcT]]'' | ||
+ | * ''[[levR]]'' | ||
+ | * ''[[licR]]'' | ||
+ | * ''[[licT]]'' | ||
+ | * ''[[manR]]'' | ||
+ | * ''[[mtlR]]'' | ||
+ | * ''[[sacT]]'' | ||
+ | * ''[[sacY]]'' | ||
+ | |||
+ | === Transcription factors/ other === | ||
+ | * ''[[acoR]]'' | ||
+ | * ''[[adhR]]'' | ||
+ | * ''[[ahrC]]'' | ||
+ | * ''[[alaR]]'' | ||
+ | * ''[[alsR]]'' | ||
+ | * ''[[ansR]]'' | ||
+ | * ''[[araR]]'' | ||
+ | * ''[[arfM]]'' | ||
+ | * ''[[arsR]]'' | ||
+ | * ''[[aseR]]'' | ||
+ | * ''[[azlB]]'' | ||
+ | * ''[[birA]]'' | ||
+ | * ''[[bkdR]]'' | ||
+ | * ''[[bltR]]'' | ||
+ | * ''[[bmrR]]'' | ||
+ | * ''[[bsdA]]'' | ||
+ | * ''[[btr]]'' | ||
+ | * ''[[catR]]'' | ||
+ | * ''[[ccpB]]'' | ||
+ | * ''[[citR]]'' | ||
+ | * ''[[comK]]'' | ||
+ | * ''[[csoR]]'' | ||
+ | * ''[[ctsR]]'' | ||
+ | * ''[[cueR]]'' | ||
+ | * ''[[cysL]]'' | ||
+ | * ''[[czrA]]'' | ||
+ | * ''[[degA]]'' | ||
+ | * ''[[deoR]]'' | ||
+ | * ''[[exuR]]'' | ||
+ | * ''[[fadR]]'' | ||
+ | * ''[[fapR]]'' | ||
+ | * ''[[fatR]]'' | ||
+ | * ''[[fnr]]'' | ||
+ | * ''[[fruR]]'' | ||
+ | * ''[[fur]]'' | ||
+ | * ''[[gabR]]'' | ||
+ | * ''[[gerE]]'' | ||
+ | * ''[[gerR]]'' | ||
+ | * ''[[glcR]]'' | ||
+ | * ''[[glnR]]'' | ||
+ | * ''[[glpP]]'' | ||
+ | * ''[[gltC]]'' | ||
+ | * ''[[gltR]]'' | ||
+ | * ''[[glvR]]'' | ||
+ | * ''[[gmuR]]'' | ||
+ | * ''[[gntR]]'' | ||
+ | * ''[[gutR]]'' | ||
+ | * ''[[hrcA]]'' | ||
+ | * ''[[hutP]]'' | ||
+ | * ''[[hxlR]]'' | ||
+ | * ''[[immR]]'' | ||
+ | * ''[[iolR]]'' | ||
+ | * ''[[kdgR]]'' | ||
+ | * ''[[kipR]]'' | ||
+ | * ''[[lacR]]'' | ||
+ | * ''[[lexA]]'' | ||
+ | * ''[[lmrA]]'' | ||
+ | * ''[[lrpA]]'' | ||
+ | * ''[[lrpB]]'' | ||
+ | * ''[[lutR]]'' | ||
+ | * ''[[lytR]]'' | ||
+ | * ''[[mdtR]]'' | ||
+ | * ''[[mgsR]]'' | ||
+ | * ''[[mhqR]]'' | ||
+ | * ''[[mntR]]'' | ||
+ | * ''[[msmR]]'' | ||
+ | * ''[[mta]]'' | ||
+ | * ''[[mtrB]]'' | ||
+ | * ''[[murR]]'' | ||
+ | * ''[[nadR]]'' | ||
+ | * ''[[nsrR]]'' | ||
+ | * ''[[ntdR]]'' | ||
+ | * ''[[ohrR]]'' | ||
+ | * ''[[padR]]'' | ||
+ | * ''[[paiB]]'' | ||
+ | * ''[[perR]]'' | ||
+ | * ''[[pksA]]'' | ||
+ | * ''[[pucR]]'' | ||
+ | * ''[[purR]]'' | ||
+ | * ''[[pyrR]]'' | ||
+ | * ''[[rbsR]]'' | ||
+ | * ''[[rex]]'' | ||
+ | * ''[[rghR]]'' | ||
+ | * ''[[rocR]]'' | ||
+ | * ''[[rok]]'' | ||
+ | * ''[[scoC]]'' | ||
+ | * ''[[sdpR]]'' | ||
+ | * ''[[senS]]'' | ||
+ | * ''[[sinR]]'' | ||
+ | * ''[[sknR]]'' | ||
+ | * ''[[slrR]]'' | ||
+ | * ''[[splA]]'' | ||
+ | * ''[[spoIIID]]'' | ||
+ | * ''[[spoVT]]'' | ||
+ | * ''[[spx]]'' | ||
+ | * ''[[tenI]]'' | ||
+ | * ''[[treR]]'' | ||
+ | * ''[[xre]]'' | ||
+ | * ''[[xylR]]'' | ||
+ | * ''[[ybgA]]'' | ||
+ | * ''[[ycbG]]'' | ||
+ | * ''[[ycnK]]'' | ||
+ | * ''[[yesS]]'' | ||
+ | * ''[[yetL]]'' | ||
+ | * ''[[yfmP]]'' | ||
+ | * ''[[yodB]]'' | ||
+ | * ''[[yofA]]'' | ||
+ | * ''[[yplP]]'' | ||
+ | * ''[[ytlI]]'' | ||
+ | * ''[[ytrA]]'' | ||
+ | * ''[[yuaC]]'' | ||
+ | * ''[[yvoA]]'' | ||
+ | * ''[[ywcC]]'' | ||
+ | * ''[[yxaF]]'' | ||
+ | * ''[[zur]]'' | ||
+ | |||
+ | === Transcription factor/ other/ based on similarity === | ||
+ | * ''[[ybfI]]'' | ||
+ | * ''[[ybfP]]'' | ||
+ | * ''[[yceK]]'' | ||
+ | * ''[[ycgE]]'' | ||
+ | * ''[[ycgK]]'' | ||
+ | * ''[[ycnC]]'' | ||
+ | * ''[[ycxD]]'' | ||
+ | * ''[[yczG]]'' | ||
+ | * ''[[ydeB]]'' | ||
+ | * ''[[ydeC]]'' | ||
+ | * ''[[ydeE]]'' | ||
+ | * ''[[ydeF]]'' | ||
+ | * ''[[ydeL]]'' | ||
+ | * ''[[ydeS]]'' | ||
+ | * ''[[ydfD]]'' | ||
+ | * ''[[ydfL]]'' | ||
+ | * ''[[ydgG]]'' | ||
+ | * ''[[ydgJ]]'' | ||
+ | * ''[[ydhC]]'' | ||
+ | * ''[[yerO]]'' | ||
+ | * ''[[yezC]]'' | ||
+ | * ''[[yezE]]'' | ||
+ | * ''[[yfiF]]'' | ||
+ | * ''[[yfiR]]'' | ||
+ | * ''[[yfiV]]'' | ||
+ | * ''[[yhbI]]'' | ||
+ | * ''[[yhcB]]'' | ||
+ | * ''[[yhcF]]'' | ||
+ | * ''[[yhdI]]'' | ||
+ | * ''[[yhgD]]'' | ||
+ | * ''[[yisR]]'' | ||
+ | * ''[[yisV]]'' | ||
+ | * ''[[ykoM]]'' | ||
+ | * ''[[ykvZ]]'' | ||
+ | * ''[[ymfC]]'' | ||
+ | * ''[[yoaU]]'' | ||
+ | * ''[[yobD]]'' | ||
+ | * ''[[yobQ]]'' | ||
+ | * ''[[yonR]]'' | ||
+ | * ''[[yozG]]'' | ||
+ | * ''[[ypoP]]'' | ||
+ | * ''[[yraN]]'' | ||
+ | * ''[[yrdQ]]'' | ||
+ | * ''[[ysmB]]'' | ||
+ | * ''[[ytdP]]'' | ||
+ | * ''[[ytzE]]'' | ||
+ | * ''[[yulB]]'' | ||
+ | * ''[[yurK]]'' | ||
+ | * ''[[yusT]]'' | ||
+ | * ''[[yvaO]]'' | ||
+ | * ''[[yvbU]]'' | ||
+ | * ''[[yvcL]]'' | ||
+ | * ''[[yvdE]]'' | ||
+ | * ''[[yvdT]]'' | ||
+ | * ''[[yvhJ]]'' | ||
+ | * ''[[yvkB]]'' | ||
+ | * ''[[ywaE]]'' | ||
+ | * ''[[ywbI]]'' | ||
+ | * ''[[ywhA]]'' | ||
+ | * ''[[ywoH]]'' | ||
+ | * ''[[ywqM]]'' | ||
+ | * ''[[ywrC]]'' | ||
+ | * ''[[yxaD]]'' | ||
+ | * ''[[yxjO]]'' | ||
+ | * ''[[yyaN]]'' | ||
+ | * ''[[yybA]]'' | ||
+ | * ''[[yybE]]'' | ||
+ | * ''[[yydK]]'' | ||
+ | |||
+ | === Control of transcription factor (other than two-component system) === | ||
+ | * ''[[abbA]]'' | ||
+ | * ''[[crh]]'' | ||
+ | * ''[[hprK]]'' | ||
+ | * ''[[immA]]'' | ||
+ | * ''[[mcsA]]'' | ||
+ | * ''[[mcsB]]'' | ||
+ | * ''[[nrgB]]'' | ||
+ | * ''[[ptsH]]'' | ||
+ | * ''[[rtpA]]'' | ||
+ | * ''[[salA]]'' | ||
+ | * ''[[sinI]]'' | ||
+ | * ''[[slrA]]'' | ||
+ | * ''[[yabJ]]'' | ||
+ | * ''[[ylbF]]'' | ||
+ | * ''[[ymcA]]'' | ||
+ | * ''[[yqfL]]'' |
Revision as of 14:52, 29 November 2010
Parent categories | |
Neighbouring categories |
|
Related categories |
none |
Contents
Reviews
P J Lewis, G P Doherty, J Clarke
Transcription factor dynamics.
Microbiology (Reading): 2008, 154(Pt 7);1837-1844
[PubMed:18599813]
[WorldCat.org]
[DOI]
(P p)
Genes in this functional category
Two-component system response regulators
- bceR
- cheY
- citT
- comA
- cssR
- dctR
- degU
- desR
- glnL
- liaR
- lytT
- malR
- natR
- phoP
- psdR
- resD
- spo0A
- walR
- ybdJ
- ycbL
- yclJ
- ydfI
- yesN
- yfiK
- yhcZ
- ykoG
- yneI
- yrkP
- yvfU
- yvrHb
- yxdJ
- yxjL
Prd-type regulators
Transcription factors/ other
- acoR
- adhR
- ahrC
- alaR
- alsR
- ansR
- araR
- arfM
- arsR
- aseR
- azlB
- birA
- bkdR
- bltR
- bmrR
- bsdA
- btr
- catR
- ccpB
- citR
- comK
- csoR
- ctsR
- cueR
- cysL
- czrA
- degA
- deoR
- exuR
- fadR
- fapR
- fatR
- fnr
- fruR
- fur
- gabR
- gerE
- gerR
- glcR
- glnR
- glpP
- gltC
- gltR
- glvR
- gmuR
- gntR
- gutR
- hrcA
- hutP
- hxlR
- immR
- iolR
- kdgR
- kipR
- lacR
- lexA
- lmrA
- lrpA
- lrpB
- lutR
- lytR
- mdtR
- mgsR
- mhqR
- mntR
- msmR
- mta
- mtrB
- murR
- nadR
- nsrR
- ntdR
- ohrR
- padR
- paiB
- perR
- pksA
- pucR
- purR
- pyrR
- rbsR
- rex
- rghR
- rocR
- rok
- scoC
- sdpR
- senS
- sinR
- sknR
- slrR
- splA
- spoIIID
- spoVT
- spx
- tenI
- treR
- xre
- xylR
- ybgA
- ycbG
- ycnK
- yesS
- yetL
- yfmP
- yodB
- yofA
- yplP
- ytlI
- ytrA
- yuaC
- yvoA
- ywcC
- yxaF
- zur
Transcription factor/ other/ based on similarity
- ybfI
- ybfP
- yceK
- ycgE
- ycgK
- ycnC
- ycxD
- yczG
- ydeB
- ydeC
- ydeE
- ydeF
- ydeL
- ydeS
- ydfD
- ydfL
- ydgG
- ydgJ
- ydhC
- yerO
- yezC
- yezE
- yfiF
- yfiR
- yfiV
- yhbI
- yhcB
- yhcF
- yhdI
- yhgD
- yisR
- yisV
- ykoM
- ykvZ
- ymfC
- yoaU
- yobD
- yobQ
- yonR
- yozG
- ypoP
- yraN
- yrdQ
- ysmB
- ytdP
- ytzE
- yulB
- yurK
- yusT
- yvaO
- yvbU
- yvcL
- yvdE
- yvdT
- yvhJ
- yvkB
- ywaE
- ywbI
- ywhA
- ywoH
- ywqM
- ywrC
- yxaD
- yxjO
- yyaN
- yybA
- yybE
- yydK