yraN

168

similar to transcriptional regulator ([wiki|LysR family])

locus: BSU_26870

Molecular weight: 33.46 kDa

pI: 8.97

Protein length: 289 aa

Gene length: 870 bp

function: unknown

product: transcriptional regulator ([wiki|LysR family])

essential: no

synonyms: yraN

List of homologs in different organisms, belongs to COG0583 (Galperin et al., 2021)

Gene

Coordinates: 2,745,594  2,746,463

The protein

Protein family

• [wiki|LysR family] (according to UniProt)

[wiki|Domains]

• [wiki|HTH lysR-type domain] (aa 1-58) (according to UniProt)

Structure

• [PDB|5Z72] (B. amyloliquefaciens [protein|FE15A41A58A8177280817CA3825764C39185021A|ccpC], 36% identity)
• [AF|O07906]

Expression and Regulation

Operons

• genes: [gene|AD1C6BA47924F07974680E1E5591DD96BA95A98A|yraN]-[gene|5AE18B11C9E13E5B121673955E01F1B1E8DB1637|yraO]

  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-A262 (yraN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/262 NBRP B. subtilis, Japan]
• BKE26870 ([gene|AD1C6BA47924F07974680E1E5591DD96BA95A98A|yraN]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE26870 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTTCATCTTCCTTTCTA,  downstream forward: _UP4_TAAAGTTATGATAGAATTTT
• BKK26870 ([gene|AD1C6BA47924F07974680E1E5591DD96BA95A98A|yraN]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK26870 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTTCATCTTCCTTTCTA,  downstream forward: _UP4_TAAAGTTATGATAGAATTTT

References

• 22383849