arfM

168

regulation of anaerobic genes

Locus: BSU_37290

Molecular weight: 17.99 kDa

Isoelectric point: 5.84

Protein length: 158 aa

Gene length: 477 bp

Function: regulation of anaerobic genes

Product: unknown

Essential: no

E.C.: null

Synonyms: arfM, ywiD

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG0664 (Galperin et al., 2021)

Gene

Coordinates: 3,830,141  3,830,617

The protein

Structure

• P46910 (AlphaFold)

Expression and Regulation

Operons

• Genes: arfM

  Description: PubMed

  Regulation

  • expressed under anaerobic conditions (Fnr) PubMed

  Regulatory mechanism

  • Fnr: activation, PubMed, in fnr regulon

  Sigma factors

  • SigA: sigma factor, PubMed, in sigA regulon

Biological materials

Mutant

• MGNA-B663 (ywiD::erm), available at the NBRP B. subtilis, Japan
• BKE37290 (arfM::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATAGGAAAACCTCCTGTGC,  downstream forward: _UP4_TAAATAGAGCCGGTTTTTTT
• BKK37290 (arfM::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATAGGAAAACCTCCTGTGC,  downstream forward: _UP4_TAAATAGAGCCGGTTTTTTT

References

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