Regulons

Overview on the regulons in B. subtilis

Sigma factors

• SigB regulon, see also SigB
• SigD regulon, see also SigD
• SigE regulon, see also SigE
• SigF regulon, see also SigF
• SigG regulon, see also SigG
• SigH regulon, see also SigH
• SigI regulon, see also SigI
• SigK regulon, see also SigK
• SigL regulon, see also SigL
• SigM regulon, see also SigM
• SigV regulon, see also SigV
• SigW regulon, see also SigW
• SigX regulon, see also SigX
• SigY regulon, see also SigY
• Xpf regulon, see also Xpf
• YlaC regulon, see also YlaC
• SigO-RsoA regulon, see also SigO and RsoA

DNA-binding regulators

• Abh regulon, see also Abh
• AbrB regulon, see also AbrB
• AcoR regulon, see also AcoR
• AdaA regulon, see also AdaA
• AdeR regulon, see also AdeR
• AdhR regulon, see also AdhR
• AhrC regulon, see also AhrC
• AlsR regulon, see also AlsR
• AnsR regulon, see also AnsR
• AraR regulon, see also AraR
• ArsR regulon, see also ArsR
• AscR regulon, see also AscR
• AseR regulon, see also AseR
• AzlB regulon, see also AzlB
• BceR regulon, see also BceR
• BirA regulon, see also BirA
• BkdR regulon, see also BkdR
• BltR regulon, see also BltR
• BmrR regulon, see also BmrR
• BsdA regulon, see also BsdA
• Btr regulon, see also Btr
• CatR regulon, see also CatR
• CcpA regulon, see also CcpA
• CcpC regulon, see also CcpC
• CcpN regulon, see also CcpN
• CggR regulon, see also CggR
• ChrS regulon, see also ChrS
• CitR regulon, see also CitR
• CitT regulon, see also CitT
• CodY regulon, see also CodY
• ComA regulon, see also ComA
• ComK regulon, see also ComK
• CsoR regulon, see also CsoR
• CssR regulon, see also CssR
• CtsR regulon, see also CtsR
• CymR regulon, see also CymR
• CysL regulon, see also CysL
• CzrA regulon, see also CzrA
• DegU regulon, see also DegU
• DeoR regulon, see also DeoR
• DesR regulon, see also DesR
• DnaA regulon, see also DnaA
• DtrR regulon, see also DtrR
• ExuR regulon, see also ExuR
• FadR regulon, see also FadR
• FapR regulon, see also FapR
• FatR regulon, see also FatR
• Fnr regulon, see also Fnr
• FrlR regulon, see also FrlR
• FruR regulon, see also FruR
• Fur regulon, see also Fur
• GabR regulon, see also GabR
• GamR regulon, see also GamR
• GbsR regulon, see also GbsR
• GerE regulon, see also GerE
• GerR regulon, see also GerR
• GlnL regulon, see also GlnL
• GlnR regulon, see also GlnR
• GltC regulon, see also GltC
• GltR regulon, see also GltR
• GlvR regulon, see also GlvR
• GmuR regulon, see also GmuR
• GntR regulon, see also GntR
• GutR regulon, see also GutR
• HrcA regulon, see also HrcA
• HxlR regulon, see also HxlR
• HypR regulon, see also HypR
• ImmR regulon, see also ImmR
• IolR regulon, see also IolR
• KdgR regulon, see also KdgR
• KipR regulon, see also KipR
• LacR regulon, see also LacR
• LevR regulon, see also LevR
• LexA regulon, see also LexA
• LiaR regulon, see also LiaR
• LicR regulon, see also LicR
• LmrA regulon, see also LmrA
• LutR regulon, see also LutR
• LytT regulon, see also LytT
• MalR regulon, see also MalR
• ManR regulon, see also ManR
• MdtR regulon, see also MdtR
• MgsR regulon, see also MgsR
• MhqR regulon, see also MhqR
• MntR regulon, see also MntR
• Mta regulon, see also Mta
• MtlR regulon, see also MtlR
• NadR regulon, see also NadR
• NagR regulon, see also NagR
• NatR regulon, see also NatR
• NrdR regulon, see also NrdR
• NsrR regulon, see also NsrR
• NtdR regulon, see also NtdR
• OhrR regulon, see also OhrR
• OpcR regulon, see also OpcR
• PadR regulon, see also PadR
• PchR regulon, see also YvmB
• PerR regulon, see also PerR
• PhoP regulon, see also PhoP
• PsdR regulon, see also PsdR
• PucR regulon, see also PucR
• PurR regulon, see also PurR
• PutR regulon, see also PutR
• QdoR regulon, see also QdoR
• RemA regulon, see also RemA
• ResD regulon, see also ResD
• Rex regulon, see also Rex
• RghR regulon, see also RghR
• RhaR regulon, see also RhaR
• RhgR regulon, see also RhgR
• RocR regulon, see also RocR
• Rok regulon, see also Rok
• RsfA regulon, see also RsfA
• SalA regulon, see also SalA
• ScoC regulon, see also ScoC
• SdpR regulon, see also SdpR
• SenS regulon, see also SenS
• SinR regulon, see also SinR
• SknR regulon, see also SknR
• SlrR regulon, see also SlrR
• Spo0A regulon, see also Spo0A
• SpoIIID regulon, see also SpoIIID
• SpoVT regulon, see also SpoVT
• Spx regulon, see also Spx
• TilS-HprT regulon, see also TilS, HprT
• ThrR regulon, see also ThrR
• TnrA regulon, see also TnrA
• TreR regulon, see also TreR
• WalR regulon, see also WalR
• Xre regulon, see also Xre
• XylR regulon, see also XylR

• YcbG regulon, see also YcbG
• YclJ regulon, see also YclJ
• YcnK regulon, see also YcnK
• YdfI regulon, see also YdfI

• YetL regulon, see also YetL
• YfhP regulon, see also YfhP
• YfiK regulon, see also YfiK
• YfmP regulon, see also YfmP
• YkrK regulon, see also YkrK
• YodB regulon, see also YodB
• YofA regulon, see also YofA
• YrkP regulon, see also YrkP
• YtrA regulon, see also YtrA
• YvrHb regulon, see also YvrHb
• YwbI regulon, see also YwbI
• YwcC regulon, see also YwcC
• YxdJ regulon, see also YxdJ
• Zur regulon, see also Zur

RNA switches

• A-box
• B12 riboswitch
• EAR riboswitch
• FMN-box
• G-box
• GlcT regulon, see also GlcT
• glmS ribozyme
• GlpP regulon, see also GlpP
• Gly-box
• HutP regulon, see also HutP
• L-box
• LicT regulon, see also LicT
• M-box
• preQ1 riboswitch
• PyrR regulon, see also PyrR
• RplT regulon, see also RplT
• SacT regulon, see also SacT
• SacY regulon, see also SacY
• S-box
• T-box
• Thi-box
• TRAP regulon, see also MtrB
• YdaO riboswitch
• yybP-ykoY motif
• RNA switch/ other

RNases

• RNase III targets
• RNase Y targets

Additional regulatory mechanisms

• BmrB regulon, see also BmrB
• CitB regulon, see also CitB
• ComN regulon, see also ComN
• CsrA regulon, see also CsrA
• FbpB regulon, see also FbpB
• fsrA regulon, see also fsrA
• Kre regulon, see also Kre
• MifM regulon, see also MifM
• as-bsrH regulon, see also as-bsrH
• as-yonT regulon, see also as-yonT
• ratA regulon, see also ratA
• RoxS regulon, see also RoxS
• SR1 regulon, see also sr1
• Stringent response

Key publications

Han Zhang, Yanbin Yin, Victor Olman, Ying Xu
Genomic arrangement of regulons in bacterial genomes.
PLoS One: 2012, 7(1);e29496
[PubMed:22235300] [WorldCat.org] [DOI] (I p)