ydaF

ydaF
168

similar to acetyltransferase

Locus
BSU_04210
Molecular weight
20.88 kDa
Isoelectric point
5.56
Protein length
183 aaSequenceBlast
Gene length
552 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
Synonyms
ydaF
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1670 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
473,174 → 473,725
The protein
Protein family
Acetyltransferase family (according to UniProt)
Domains
N-acetyltransferase domain (aa 10-176) (according to UniProt)
Structure
1NSL (PDB)\tPubMed
P96579 (AlphaFold)
Paralogous protein(s)
YjcK
Expression and Regulation
Operons
Genes
ydaF-ydaG
Description
PubMed
Open in new tab

ydaF→ydaG

2025-03-08 14:15:38

Jstuelk

72

274d05bc99b84129af0dc4c123bf28394b0935e6

27CF20D9A51B37DB84B21F3DD0F0554697F8DAF7

Genes
ydaD-ydaE-ydaF-ydaG
Description
PubMed
Regulation
induced by stress (SigB) PubMed
Expression
expression is increased upon depletion of depletion of tRNA maturation factors rnpB or rnz PubMed
Sigma factors
SigB: sigma factor, PubMed, in sigB regulon
Open in new tab

ydaD→ydaG

2025-04-04 01:52:57

Jstuelk

90

0F01F3D4A72C13FC2BD8814FCB16A6972198E29F

A2B50F578CB3D7FDB3773EE82697C8F07A97C986

Biological materials
Mutant
MGNA-C088 (ydaF::erm), available at the NBRP B. subtilis, Japan
BKE04210 (ΔydaF::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTGCCTCGCCCTCTTTCC,  downstream forward: _UP4_TAAAGAGCACACTTTCTTGT
BKK04210 (ΔydaF::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTGCCTCGCCCTCTTTCC,  downstream forward: _UP4_TAAAGAGCACACTTTCTTGT
References
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BFDAB855DC76A78C100DC5E5FB81F73069F5F93F

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Time of last update: 2025-04-04 07:44:08

Author of last update: Jstuelk