yxlF
168
similar to [wiki|ABC transporter] ([metabolite|ATP]-binding protein)
locus
BSU_38660
Molecular weight
33.03 kDa
pI
8.23
function
unknown
product
[wiki|ABC transporter] ([metabolite|ATP]-binding protein)
essential
no
synonyms
yxlF
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1131 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,968,717 → 3,969,604
The protein
Protein family
[wiki|ABC transporter superfamily] (according to UniProt)
[wiki|Domains]
[wiki|ABC transporter domain] (aa 2-226) (according to UniProt)
Structure
[PDB|4YER] (from Thermotoga maritima, 37% identity)
[AF|P94374]
Expression and Regulation
Operons
genes
[gene|801E92306971E26AD4AB155172B7F4EFDE2F9170|sigY]-[gene|C07156CBA0AA3BAB24D17D15708FC68E74A854A7|yxlC]-[gene|CAADFAFD4C39362D0D0F242C926AE101C683EB5D|yxlD]-[gene|B40D01DDD9EF8B64E46CA7DBF4BAC3DBF8A73986|yxlE]-[gene|D246F61BEAE0D3D6707B4C43A634C02876CC5395|yxlF]-[gene|DCC03844AC58A198B851B564D0A6459C39EBDA2F|yxlG]
description
[Pubmed|14769884]
sigma factors
[protein|801E92306971E26AD4AB155172B7F4EFDE2F9170|sigY]: sigma factor, [Pubmed|12897008], in [regulon|protein:801E92306971E26AD4AB155172B7F4EFDE2F9170|sigY regulon]
Biological materials
Mutant
MGNA-B752 (yxlF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1751 NBRP B. subtilis, Japan]
BKE38660 (Δ[gene|D246F61BEAE0D3D6707B4C43A634C02876CC5395|yxlF]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE38660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGATTCAATAGACAGCATAT, downstream forward: _UP4_GTCTATCTAAAGGTGGTGCA
BKK38660 (Δ[gene|D246F61BEAE0D3D6707B4C43A634C02876CC5395|yxlF]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK38660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGATTCAATAGACAGCATAT, downstream forward: _UP4_GTCTATCTAAAGGTGGTGCA
References
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Time of last update: 2024-12-18 08:25:06
Author of last update: Jstuelk