yxlD
168
negative regulation of [protein|801E92306971E26AD4AB155172B7F4EFDE2F9170|sigY]-directed transcription of the [gene|801E92306971E26AD4AB155172B7F4EFDE2F9170|sigY] operon
locus
BSU_38680
Molecular weight
7.71 kDa
pI
10.27
function
negative regulation of [protein|801E92306971E26AD4AB155172B7F4EFDE2F9170|sigY]-directed transcription of the [gene|801E92306971E26AD4AB155172B7F4EFDE2F9170|sigY] operon
product
unknown
essential
no
synonyms
yxlD
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms
This gene is a member of the following regulons
Gene
Coordinates
3,969,796 → 3,970,002
Phenotypes of a mutant
the mutant tends to acquire suppressor mutations that result in improved growth [Pubmed|28189581]
The protein
Structure
[AF|P94372]
Expression and Regulation
Operons
genes
[gene|801E92306971E26AD4AB155172B7F4EFDE2F9170|sigY]-[gene|C07156CBA0AA3BAB24D17D15708FC68E74A854A7|yxlC]-[gene|CAADFAFD4C39362D0D0F242C926AE101C683EB5D|yxlD]-[gene|B40D01DDD9EF8B64E46CA7DBF4BAC3DBF8A73986|yxlE]-[gene|D246F61BEAE0D3D6707B4C43A634C02876CC5395|yxlF]-[gene|DCC03844AC58A198B851B564D0A6459C39EBDA2F|yxlG]
description
[Pubmed|14769884]
sigma factors
[protein|801E92306971E26AD4AB155172B7F4EFDE2F9170|sigY]: sigma factor, [Pubmed|12897008], in [regulon|protein:801E92306971E26AD4AB155172B7F4EFDE2F9170|sigY regulon]
additional information
the mRNA is cleaved by [protein|BAB297D18F94FFA67B8D12A684AB4D1BCDFB4981|RNase III] [PubMed|26883633]
Biological materials
Mutant
MGNA-B759 (yxlD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1758 NBRP B. subtilis, Japan]
BKE38680 (Δ[gene|CAADFAFD4C39362D0D0F242C926AE101C683EB5D|yxlD]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE38680 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGTCATCCGCGTTTCACCTC, downstream forward: _UP4_CAATGAATATTTCTTGGGAA
BKK38680 (Δ[gene|CAADFAFD4C39362D0D0F242C926AE101C683EB5D|yxlD]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK38680 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGTCATCCGCGTTTCACCTC, downstream forward: _UP4_CAATGAATATTTCTTGGGAA
References
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Time of last update: 2024-12-01 19:40:30
Author of last update: Jstuelk