Difference between revisions of "Biofilm formation"
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Revision as of 06:13, 7 July 2014
Biofilms are the result of the multicellular lifestyle of B. subtilis. They are characterized by the formation of a matrix polysaccharide and an amyloid-like protein, TasA. Correction of sfp, epsC, swrAA, and degQ as well as introduction of rapP from a plasmid present in NCIB3610 results in biofilm formation in B. subtilis 168 PubMed.
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Contents
Biofilm formation in SubtiPathways
Labs working on biofilm formation
- Daniel Kearns
- Roberto Kolter
- Akos T Kovacs
- Oscar Kuipers
- Beth Lazazzera
- Richard Losick
- Nicola Stanley-Wall
- Jörg Stülke
Key genes and operons involved in biofilm formation
- matrix polysaccharide synthesis:
- amyloid protein synthesis, secretion and assembly
- repellent surface layer
- regulation
- other proteins required for biofilm formation
Important original publications
Thomas M Norman, Nathan D Lord, Johan Paulsson, Richard Losick
Memory and modularity in cell-fate decision making.
Nature: 2013, 503(7477);481-486
[PubMed:24256735]
[WorldCat.org]
[DOI]
(I p)
Fernando Gómez-Aguado, María Teresa Corcuera, María Luisa Gómez-Lus, María Antonia de la Parte, Carmen Ramos, César García-Rey, María José Alonso, José Prieto
Histological approach to Bacillus subtilis colony-biofilm: evolving internal architecture and sporulation dynamics.
Histol Histopathol: 2013, 28(10);1351-60
[PubMed:23645570]
[WorldCat.org]
[DOI]
(I p)
Iztok Dogsa, Mojca Brloznik, David Stopar, Ines Mandic-Mulec
Exopolymer diversity and the role of levan in Bacillus subtilis biofilms.
PLoS One: 2013, 8(4);e62044
[PubMed:23637960]
[WorldCat.org]
[DOI]
(I e)
Pascale B Beauregard, Yunrong Chai, Hera Vlamakis, Richard Losick, Roberto Kolter
Bacillus subtilis biofilm induction by plant polysaccharides.
Proc Natl Acad Sci U S A: 2013, 110(17);E1621-30
[PubMed:23569226]
[WorldCat.org]
[DOI]
(I p)
Moshe Shemesh, Yunrong Chai
A combination of glycerol and manganese promotes biofilm formation in Bacillus subtilis via histidine kinase KinD signaling.
J Bacteriol: 2013, 195(12);2747-54
[PubMed:23564171]
[WorldCat.org]
[DOI]
(I p)
A Bridier, T Meylheuc, R Briandet
Realistic representation of Bacillus subtilis biofilms architecture using combined microscopy (CLSM, ESEM and FESEM).
Micron: 2013, 48;65-9
[PubMed:23517761]
[WorldCat.org]
[DOI]
(I p)
Thomas Böttcher, Ilana Kolodkin-Gal, Roberto Kolter, Richard Losick, Jon Clardy
Synthesis and activity of biomimetic biofilm disruptors.
J Am Chem Soc: 2013, 135(8);2927-30
[PubMed:23406351]
[WorldCat.org]
[DOI]
(I p)
Miguel Trejo, Carine Douarche, Virginie Bailleux, Christophe Poulard, Sandrine Mariot, Christophe Regeard, Eric Raspaud
Elasticity and wrinkled morphology of Bacillus subtilis pellicles.
Proc Natl Acad Sci U S A: 2013, 110(6);2011-6
[PubMed:23341623]
[WorldCat.org]
[DOI]
(I p)
James N Wilking, Vasily Zaburdaev, Michael De Volder, Richard Losick, Michael P Brenner, David A Weitz
Liquid transport facilitated by channels in Bacillus subtilis biofilms.
Proc Natl Acad Sci U S A: 2013, 110(3);848-52
[PubMed:23271809]
[WorldCat.org]
[DOI]
(I p)
Munehiro Asally, Mark Kittisopikul, Pau Rué, Yingjie Du, Zhenxing Hu, Tolga Çağatay, Andra B Robinson, Hongbing Lu, Jordi Garcia-Ojalvo, Gürol M Süel
Localized cell death focuses mechanical forces during 3D patterning in a biofilm.
Proc Natl Acad Sci U S A: 2012, 109(46);18891-6
[PubMed:23012477]
[WorldCat.org]
[DOI]
(I p)
Yun Chen, Fang Yan, Yunrong Chai, Hongxia Liu, Roberto Kolter, Richard Losick, Jian-Hua Guo
Biocontrol of tomato wilt disease by Bacillus subtilis isolates from natural environments depends on conserved genes mediating biofilm formation.
Environ Microbiol: 2013, 15(3);848-864
[PubMed:22934631]
[WorldCat.org]
[DOI]
(I p)
Juan C Garcia-Betancur, Ana Yepes, Johannes Schneider, Daniel Lopez
Single-cell analysis of Bacillus subtilis biofilms using fluorescence microscopy and flow cytometry.
J Vis Exp: 2012, (60);
[PubMed:22371091]
[WorldCat.org]
[DOI]
(I e)
Agnese Seminara, Thomas E Angelini, James N Wilking, Hera Vlamakis, Senan Ebrahim, Roberto Kolter, David A Weitz, Michael P Brenner
Osmotic spreading of Bacillus subtilis biofilms driven by an extracellular matrix.
Proc Natl Acad Sci U S A: 2012, 109(4);1116-21
[PubMed:22232655]
[WorldCat.org]
[DOI]
(I p)
Anna L McLoon, Sarah B Guttenplan, Daniel B Kearns, Roberto Kolter, Richard Losick
Tracing the domestication of a biofilm-forming bacterium.
J Bacteriol: 2011, 193(8);2027-34
[PubMed:21278284]
[WorldCat.org]
[DOI]
(I p)
Arnaud Bridier, Dominique Le Coq, Florence Dubois-Brissonnet, Vincent Thomas, Stéphane Aymerich, Romain Briandet
The spatial architecture of Bacillus subtilis biofilms deciphered using a surface-associated model and in situ imaging.
PLoS One: 2011, 6(1);e16177
[PubMed:21267464]
[WorldCat.org]
[DOI]
(I e)
Nicola R Stanley, Beth A Lazazzera
Defining the genetic differences between wild and domestic strains of Bacillus subtilis that affect poly-gamma-dl-glutamic acid production and biofilm formation.
Mol Microbiol: 2005, 57(4);1143-58
[PubMed:16091050]
[WorldCat.org]
[DOI]
(P p)
Key reviews
Lynne S Cairns, Laura Hobley, Nicola R Stanley-Wall
Biofilm formation by Bacillus subtilis: new insights into regulatory strategies and assembly mechanisms.
Mol Microbiol: 2014, 93(4);587-98
[PubMed:24988880]
[WorldCat.org]
[DOI]
(I p)
Benjamin Mielich-Süss, Daniel Lopez
Molecular mechanisms involved in Bacillus subtilis biofilm formation.
Environ Microbiol: 2015, 17(3);555-65
[PubMed:24909922]
[WorldCat.org]
[DOI]
(I p)
Dennis Claessen, Daniel E Rozen, Oscar P Kuipers, Lotte Søgaard-Andersen, Gilles P van Wezel
Bacterial solutions to multicellularity: a tale of biofilms, filaments and fruiting bodies.
Nat Rev Microbiol: 2014, 12(2);115-24
[PubMed:24384602]
[WorldCat.org]
[DOI]
(I p)
Robert Belas
When the swimming gets tough, the tough form a biofilm.
Mol Microbiol: 2013, 90(1);1-5
[PubMed:23927648]
[WorldCat.org]
[DOI]
(I p)
Diego Romero
Bacterial determinants of the social behavior of Bacillus subtilis.
Res Microbiol: 2013, 164(7);788-98
[PubMed:23791621]
[WorldCat.org]
[DOI]
(I p)
Hera Vlamakis, Yunrong Chai, Pascale Beauregard, Richard Losick, Roberto Kolter
Sticking together: building a biofilm the Bacillus subtilis way.
Nat Rev Microbiol: 2013, 11(3);157-68
[PubMed:23353768]
[WorldCat.org]
[DOI]
(I p)
Elizabeth Anne Shank, Roberto Kolter
Extracellular signaling and multicellularity in Bacillus subtilis.
Curr Opin Microbiol: 2011, 14(6);741-7
[PubMed:22024380]
[WorldCat.org]
[DOI]
(I p)
Tjakko Abee, Akos T Kovács, Oscar P Kuipers, Stijn van der Veen
Biofilm formation and dispersal in Gram-positive bacteria.
Curr Opin Biotechnol: 2011, 22(2);172-9
[PubMed:21109420]
[WorldCat.org]
[DOI]
(I p)
Roberto Kolter
Biofilms in lab and nature: a molecular geneticist's voyage to microbial ecology.
Int Microbiol: 2010, 13(1);1-7
[PubMed:20890834]
[WorldCat.org]
[DOI]
(I p)
Massimiliano Marvasi, Pieter T Visscher, Lilliam Casillas Martinez
Exopolymeric substances (EPS) from Bacillus subtilis: polymers and genes encoding their synthesis.
FEMS Microbiol Lett: 2010, 313(1);1-9
[PubMed:20735481]
[WorldCat.org]
[DOI]
(I p)
Daniel López, Hera Vlamakis, Roberto Kolter
Biofilms.
Cold Spring Harb Perspect Biol: 2010, 2(7);a000398
[PubMed:20519345]
[WorldCat.org]
[DOI]
(I p)
Daniel Lopez, Hera Vlamakis, Roberto Kolter
Generation of multiple cell types in Bacillus subtilis.
FEMS Microbiol Rev: 2009, 33(1);152-63
[PubMed:19054118]
[WorldCat.org]
[DOI]
(P p)
Hera Vlamakis, Claudio Aguilar, Richard Losick, Roberto Kolter
Control of cell fate by the formation of an architecturally complex bacterial community.
Genes Dev: 2008, 22(7);945-53
[PubMed:18381896]
[WorldCat.org]
[DOI]
(P p)
Wolf-Rainer Abraham
Controlling biofilms of gram-positive pathogenic bacteria.
Curr Med Chem: 2006, 13(13);1509-24
[PubMed:16787201]
[WorldCat.org]
[DOI]
(P p)
J A Shapiro
Thinking about bacterial populations as multicellular organisms.
Annu Rev Microbiol: 1998, 52;81-104
[PubMed:9891794]
[WorldCat.org]
[DOI]
(P p)