Difference between revisions of "ABC transporters"
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* [[OpuCA]]-[[OpuCB]]-[[OpuCC]]-[[OpuCD]]: [[ABC transporter]] for glycine betaine/ carnitine/ choline | * [[OpuCA]]-[[OpuCB]]-[[OpuCC]]-[[OpuCD]]: [[ABC transporter]] for glycine betaine/ carnitine/ choline | ||
| − | ==Uptake of iron/ siderophores== | + | ==[[Iron metabolism|Uptake of iron/ siderophores]]== |
* [[YusV]]-[[FeuB]]-[[FeuC]]-[[FeuA]]: uptake of the siderophores enterobactin and bacillibactin | * [[YusV]]-[[FeuB]]-[[FeuC]]-[[FeuA]]: uptake of the siderophores enterobactin and bacillibactin | ||
* [[FhuC]]-[[FhuB]]-[[FhuG]]-[[FhuD]]-[[YxeB]]: uptake of ferrichrome und ferrioxamine | * [[FhuC]]-[[FhuB]]-[[FhuG]]-[[FhuD]]-[[YxeB]]: uptake of ferrichrome und ferrioxamine | ||
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* [[FtsE]]-[[FtsX]]: activation of [[Spo0A]] and initiation of sporulation | * [[FtsE]]-[[FtsX]]: activation of [[Spo0A]] and initiation of sporulation | ||
* [[YheH]]-[[YheI]]: involved in the signalling pathway to activate [[KinA]] at the onset of sporulation | * [[YheH]]-[[YheI]]: involved in the signalling pathway to activate [[KinA]] at the onset of sporulation | ||
| − | * [[SufC]]: required for the synthesis of Fe-S clusters | + | * [[SufC]]: required for the [[Iron metabolism|synthesis of Fe-S clusters]] |
* [[YydI]]-([[YydJ]]-[[YydH]]): control of [[LiaR]]-[[LiaS]] activity | * [[YydI]]-([[YydJ]]-[[YydH]]): control of [[LiaR]]-[[LiaS]] activity | ||
Revision as of 10:22, 16 April 2011
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Contents
- 1 Importers
- 2 Exporters
- 3 Regulatory ABC transporters
- 4 Relevant publications
- 5 Back to categories
Importers
Uptake of carbon sources
- YurJ-(FrlM-FrlN)-FrlO: uptake of aminosugars
- AraN, AraP, AraQ: uptake of arabinose
- CycB, YvfL, YvfM: uptake of cyclodextrin/maltodextrin (probably)
- MdxE, MdxF, MdxG: uptake of maltodextrin
- AmyC, AmyD, MsmE: uptake of melibiose (probably)
- RbsA, RbsB, RbsC, RbsD: uptake of ribose
- (YtrB-YtrE)-(YtrC-YtrD)-YtrF: uptake of acetoin
ATPase subunit of multiple sugar transport systems
Uptake of amino acids
- ArtP, ArtQ, ArtR: uptake of arginine
- TcyJ, TcyK, TcyL, TcyM, TcyN: uptake of cystine
- TcyA, TcyB, TcyC: uptake of cystine
- GlnH, GlnM, GlnP, GlnQ: uptake of glutamine
- MetN, MetP, MetQ: uptake of methionine
Uptake of peptides
- AppA, AppB, AppC, AppD, AppF: uptake of oligopeptides
- DppB, DppC, DppD, DppE, YkfD: uptake of dipeptides
- OppA, OppB, OppC, OppD, OppF: uptake of oligopeptides
Uptake of compatible solutes for osmoprotection
- OpuAA-OpuAB-OpuAC: ABC transporter for glycine betaine
- OpuBA-OpuBB-OpuBC-OpuBD: ABC transporter for choline
- OpuCA-OpuCB-OpuCC-OpuCD: ABC transporter for glycine betaine/ carnitine/ choline
Uptake of iron/ siderophores
- YusV-FeuB-FeuC-FeuA: uptake of the siderophores enterobactin and bacillibactin
- FhuC-FhuB-FhuG-FhuD-YxeB: uptake of ferrichrome und ferrioxamine
- YclN-YclO-YclP-YclQ: uptake of petrobactin
- YusV-YfiZ-YfhA-YfiY: uptake of the siderophores schizokinen and arthrobactin
- YfmF-YfmD-YfmE-YfmC-YhfQ: uptake of iron/citrate
Uptake of ions
- MntB-MntA-MntC-MntD: uptake of manganese
- PstBA-PstBB-PstS-PstC-PstA: uptake of phosphate
- SsuA-SsuB-SsuC: uptake of aliphatic sulfonate
- YcdI-YceA-YcdH: uptake of zinc
- YvgM-YvgL: uptake of molybdenum (probably)
Uptake of cofactors
ABC transporters of unknown function
- LplA-LplB-LplC
- YckA-YckB
- YesO-YesP-YesQ
- YhjP
- YjkB-YjkA
- YlmA
- YtcP-YtcQ-YteP
- YtlC-YtlD-YtlA
- YufO-YufP-YufQ
- YvrA-YvrB-YvrC
- YxeM-YxeN-YxeO
Exporters
Efflux of antibiotics
- VmlR: efflux of virginiamycin M and lincomycin
- BmrA: efflux of multiple antibiotics
- YheH-YheI: efflux of multiple antibiotics
Export of antibiotic substances
Export of toxic peptides
- SkfE-SkfF
- YknY-YknZ
- BceA-BceB: export of bacitracin, plectasin, mersacidin and actagardine
- YxdL-YxdM
- PsdA-PsdB: export of lipid II-binding lantibiotics, such as nisin and gallidermin
Export of cell wall components
Export of ions
Exporters of unknown function
- (YbxA-YbaE)-YbaF
- YcbN
- YclH-YclI
- YdbJ-YdbK
- YdiF
- YfiB-YfiC
- YfiL-YfiM-YfiN
- YfmM
- YfmR
- YgaD
- YhaQ-YhaP
- YhcG-YhcE
- YhcH-YhcI
- YknU-YknV
- YkpA
- YthP-YthQ
- YvfR-YvfS
- YvrO-YvrN
- YwjA
- YxlF-YxlG
- YybJ-(YybK-YybL)
Regulatory ABC transporters
- CydC-CydD: required for expression of cytochrome bd
- EcsA-EcsB: regulation of the secretion apparatus and of intra-membrane proteolysis
- FtsE-FtsX: activation of Spo0A and initiation of sporulation
- YheH-YheI: involved in the signalling pathway to activate KinA at the onset of sporulation
- SufC: required for the synthesis of Fe-S clusters
- YydI-(YydJ-YydH): control of LiaR-LiaS activity
Relevant publications
Thomas Eitinger, Dmitry A Rodionov, Mathias Grote, Erwin Schneider
Canonical and ECF-type ATP-binding cassette importers in prokaryotes: diversity in modular organization and cellular functions.
FEMS Microbiol Rev: 2011, 35(1);3-67
[PubMed:20497229]
[WorldCat.org]
[DOI]
(I p)
Amy L Davidson, Elie Dassa, Cedric Orelle, Jue Chen
Structure, function, and evolution of bacterial ATP-binding cassette systems.
Microbiol Mol Biol Rev: 2008, 72(2);317-64, table of contents
[PubMed:18535149]
[WorldCat.org]
[DOI]
(I p)
Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453]
[WorldCat.org]
[DOI]
(P p)
C F Higgins
ABC transporters: from microorganisms to man.
Annu Rev Cell Biol: 1992, 8;67-113
[PubMed:1282354]
[WorldCat.org]
[DOI]
(P p)
