GatA

From SubtiWiki
Revision as of 15:20, 11 November 2013 by 134.76.70.252 (talk)
Jump to: navigation, search
  • Description: production of glutamyl-tRNA(Gln)

Gene name gatA
Synonyms yerM, yedB
Essential yes PubMed
Product glutamyl-tRNA(Gln) amidotransferase subunit A
Function translation
Gene expression levels in SubtiExpress: gatA
Interactions involving this protein in SubtInteract: GatA
Metabolic function and regulation of this protein in SubtiPathways:
tRNA charging
MW, pI 52 kDa, 5.24
Gene length, protein length 1455 bp, 485 aa
Immediate neighbours gatC, gatB
Sequences Protein DNA DNA_with_flanks
Genetic context
GatA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GatA expression.png















Categories containing this gene/protein

translation, essential genes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU06680

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + L-glutamyl-tRNA(Gln) + L-glutamine = ADP + phosphate + L-glutaminyl-tRNA(Gln) + L-glutamate (according to Swiss-Prot)
  • Protein family: amidase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References