Difference between revisions of "Cofactors"

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Line 29: Line 29:
 
= FMN =
 
= FMN =
 
* [[YtvA]]
 
* [[YtvA]]
 +
 +
= Flavoproteins =
 +
* [[YacF]]
 +
* [[NdhF]]
 +
* [[YcgT]]
 +
* [[YclD]]
 +
* [[YcnD]]
 +
* [[YdbM]]
 +
* [[YddN]]
 +
* [[YdeQ]]
 +
* [[YdfE]]
 +
* [[YerD]]
 +
* [[YetM]]
 +
* [[Nos]]
 +
* [[HypO]]
 +
* [[YfjN]]
 +
 
<pubmed>21635694</pubmed>
 
<pubmed>21635694</pubmed>
  

Revision as of 18:25, 2 November 2015

NAD+

NADP+

FAD

FMN

Flavoproteins

Peter Macheroux, Barbara Kappes, Steven E Ealick
Flavogenomics--a genomic and structural view of flavin-dependent proteins.
FEBS J: 2011, 278(15);2625-34
[PubMed:21635694] [WorldCat.org] [DOI] (I p)


S-adenosyl-L-methionine (SAM)

Biotin

Calcium

Copper

Nickel

Mark A Farrugia, Lee Macomber, Robert P Hausinger
Biosynthesis of the urease metallocenter.
J Biol Chem: 2013, 288(19);13178-85
[PubMed:23539618] [WorldCat.org] [DOI] (I p)

Harini Kaluarachchi, Kim C Chan Chung, Deborah B Zamble
Microbial nickel proteins.
Nat Prod Rep: 2010, 27(5);681-94
[PubMed:20442959] [WorldCat.org] [DOI] (I p)

Stephen W Ragsdale
Nickel-based Enzyme Systems.
J Biol Chem: 2009, 284(28);18571-5
[PubMed:19363030] [WorldCat.org] [DOI] (P p)


Manganese

dimanganic-tyrosyl radical cofactor

Zinc

MoCo (molybdenum cofactor, molybdopterin)

Iron-sulfur cluster

Heme A

Heme b

Protoheme IX

Thiamine pyrophosphate, TPP

E1 subunits of ketoacid dehydrogenases/ acetoin dehydrogenase

Lipoic acid

E2 subunits of ketoacid dehydrogenases/ acetoin dehydrogenase

H protein of the glycine cleavage system

  • GcvH (also required for LipL-catalyzed octanoyl transfer from AcpA to the E2s)

Pyridoxyl phosphate, PLP

Tetrahydrofalate

Methylene-THF