Difference between revisions of "CotW"
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| − | * '''Description:''' spore coat protein (insoluble fraction), formation of the spore crust <br/><br/> | + | * '''Description:''' outer spore coat protein (insoluble fraction), formation of the spore crust <br/><br/> |
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
{{SubtiWiki regulon|[[GerE regulon]]}}, | {{SubtiWiki regulon|[[GerE regulon]]}}, | ||
| − | {{SubtiWiki regulon|[[SigK regulon]]}} | + | {{SubtiWiki regulon|[[SigE regulon]]}} |
| + | {{SubtiWiki regulon|[[SigK regulon]]}}, | ||
| + | {{SubtiWiki regulon|[[SpoIIID regulon]]}} | ||
=The gene= | =The gene= | ||
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* '''[[Localization]]:''' | * '''[[Localization]]:''' | ||
| + | ** outer spore coat, localization depends on [[CotE]] {{PubMed|22171814}} | ||
=== Database entries === | === Database entries === | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotW_1251273_1251590_-1 cotW] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotW_1251273_1251590_-1 cotW] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigK]] {{PubMed|15699190,7519271}} | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15383836}} , [[SigK]] {{PubMed|15699190,7519271}} |
| − | * '''Regulation:''' repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed] | + | * '''Regulation:''' |
| + | ** expressed during sporulation in the mother cell ([[SigE]], [[SigK]], [[GerE]], [[SpoIIID]]) {{PubMed|15383836}} | ||
| + | ** repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed] | ||
| − | * '''Regulatory mechanism:''' [[GerE]]: transcription activation [ | + | * '''Regulatory mechanism:''' |
| + | ** [[GerE]]: transcription activation {{PubMed|15383836}} | ||
| + | ** [[SpoIIID]]: transcription activation {{PubMed|15383836}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
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=References= | =References= | ||
| − | <pubmed>7519271,19304857, 21665972,12107147, </pubmed> | + | <pubmed>7519271,19304857, 21665972,12107147, 15383836 22171814</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 16:51, 13 August 2013
- Description: outer spore coat protein (insoluble fraction), formation of the spore crust
| Gene name | cotW |
| Synonyms | |
| Essential | no |
| Product | spore coat protein (insoluble fraction) |
| Function | resistance of the spore |
| Gene expression levels in SubtiExpress: cotW | |
| Interactions involving this protein in SubtInteract: CotW | |
| MW, pI | 12 kDa, 9.955 |
| Gene length, protein length | 315 bp, 105 aa |
| Immediate neighbours | cotX, cotV |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
GerE regulon, SigE regulon SigK regulon, SpoIIID regulon
The gene
Basic information
- Locus tag: BSU11770
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: Q08310
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
