Difference between revisions of "GatB"
| Line 38: | Line 38: | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
| − | + | <br/><br/> | |
| − | |||
| − | |||
| − | |||
| − | |||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| Line 102: | Line 98: | ||
=== Database entries === | === Database entries === | ||
| − | * '''Structure:''' | + | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=2DF4 2DF4] ([[GatA]]-[[GatB]]-[[GatC]] complex from ''Staphylococcus aureus'') {{PubMed|16809541}} |
* '''UniProt:''' [http://www.uniprot.org/uniprot/O30509 O30509] | * '''UniProt:''' [http://www.uniprot.org/uniprot/O30509 O30509] | ||
| Line 118: | Line 114: | ||
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=gatB_730509_731939_1 gatB] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=gatB_730509_731939_1 gatB] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 146: | Line 142: | ||
=References= | =References= | ||
| − | <pubmed>9342321,20882017, </pubmed> | + | <pubmed>9342321,20882017, 16809541</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 14:46, 12 July 2013
- Description: production of glutamyl-tRNA(Gln)
| Gene name | gatB |
| Synonyms | yerN |
| Essential | yes PubMed |
| Product | glutamyl-tRNA(Gln) amidotransferase (sununit B) |
| Function | translation |
| Gene expression levels in SubtiExpress: gatB | |
| Interactions involving this protein in SubtInteract: GatB | |
| Metabolic function and regulation of this protein in SubtiPathways: tRNA charging | |
| MW, pI | 53 kDa, 4.898 |
| Gene length, protein length | 1428 bp, 476 aa |
| Immediate neighbours | gatA, yerO |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU06690
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + L-glutamyl-tRNA(Gln) + L-glutamine = ADP + phosphate + L-glutaminyl-tRNA(Gln) + L-glutamate (according to Swiss-Prot)
- Protein family: GatB subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- UniProt: O30509
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
