Difference between revisions of "SigG"

From SubtiWiki
Jump to: navigation, search
(Database entries)
(Expression and regulation)
Line 92: Line 92:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''[[spoIIGA]]-[[sigE]]-[[sigG]]''
 +
''[[sigG]]''
  
* '''Sigma factor:'''  
+
* '''Sigma factor:''' ''[[spoIIGA]]'': [[SigA]], ''[[sigG]]'': [[SigF]], [[SigG]]
  
* '''Regulation:'''  
+
* '''Regulation:''' spoIIGA: expressed early during sporulation ([[Spo0A]])
 +
''[[sigG]]'': expressed during sporulation
  
* '''Regulatory mechanism:'''  
+
* '''Regulatory mechanism:''' activated by [[Spo0A]], repression by [[SinR]]
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 08:32, 12 February 2009

  • Description: write here

Gene name sigG
Synonyms spoIIIG
Essential no
Product RNA polymerase sporulation-specific sigma factor (sigma-G)
Function late forespore-specific gene expression
MW, pI 29 kDa, 5.496
Gene length, protein length 780 bp, 260 aa
Immediate neighbours
Gene sequence (+200bp) Protein sequence
Genetic context
SigG context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Genes controlled by SigF

dacF-spoIIAA-spoIIAB-sigF

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

sigG

  • Regulation: spoIIGA: expressed early during sporulation (Spo0A)

sigG: expressed during sporulation

  • Regulatory mechanism: activated by Spo0A, repression by SinR
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed