Difference between revisions of "YdgF"

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(Extended information on the protein)
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* '''Description:''' similar to amino acid permease <br/><br/>
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU05620 ydgF]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 50 kDa, 9.337   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 50 kDa, 9.337   

Revision as of 15:28, 6 August 2012


Gene name ydgF
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ydgF
MW, pI 50 kDa, 9.337
Gene length, protein length 1374 bp, 458 aa
Immediate neighbours vmlR, dinB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdgF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdgF expression.png
























Categories containing this gene/protein

transporters/ other, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU05620

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: amino acid-polyamine-organocation (APC) superfamily (according to Swiss-Prot)

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Irnov Irnov, Cynthia M Sharma, Jörg Vogel, Wade C Winkler
Identification of regulatory RNAs in Bacillus subtilis.
Nucleic Acids Res: 2010, 38(19);6637-51
[PubMed:20525796] [WorldCat.org] [DOI] (I p)