Difference between revisions of "BkdAA"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU24050&redirect=T BSU24050]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ptb-bcd-buk-lpdV-bkdAABB.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ptb-bcd-buk-lpdV-bkdAABB.html]
Line 93: Line 94:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU24050&redirect=T BSU24050]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=1UMB 1UMB] (from ''  Thermus thermophilus'', 42% identity, 57% similarity) {{PubMed|15033367}}
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=1UMB 1UMB] (from ''  Thermus thermophilus'', 42% identity, 57% similarity) {{PubMed|15033367}}

Revision as of 14:09, 2 April 2014

  • Description: 2-oxoisovalerate dehydrogenase (E1 alpha subunit)

Gene name bkdAA
Synonyms bfmBAA, bfmB1a, bkd
Essential no
Product 2-oxoisovalerate dehydrogenase (E1 alpha subunit)
Function utilization of branched-chain keto acids
Gene expression levels in SubtiExpress: bkdAA
Metabolic function and regulation of this protein in SubtiPathways:
bkdAA
MW, pI 36 kDa, 4.778
Gene length, protein length 990 bp, 330 aa
Immediate neighbours bkdAB, lpdV
Sequences Protein DNA DNA_with_flanks
Genetic context
BkdAA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
BkdAA expression.png















Categories containing this gene/protein

utilization of amino acids

This gene is a member of the following regulons

BkdR regulon, CodY regulon, SigL regulon

The gene

Basic information

  • Locus tag: BSU24050

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: 3-methyl-2-oxobutanoate + [dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] lipoyllysine = [dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] S-(2-methylpropanoyl)dihydrolipoyllysine + CO2 (according to Swiss-Prot)
  • Protein family: BCKDHA family (according to Swiss-Prot)

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1UMB (from Thermus thermophilus, 42% identity, 57% similarity) PubMed
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • induced in the presence of isoleucine or valine (BkdR) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References