Difference between revisions of "YdgF"

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(Basic information/ Evolution)
Line 67: Line 67:
 
* '''Protein family:'''  
 
* '''Protein family:'''  
 
** secondary amino acid transporter
 
** secondary amino acid transporter
** amino acid, polyamine, organocation (APC) family of transporters, [http://www.tcdb.org/search/result.php?tc=2.A.3 TC 2.A.3]
+
** [[APC superfamily of transport proteins|amino acid, polyamine, organocation (APC) superfamily of transporters]], [http://www.tcdb.org/search/result.php?tc=2.A.3 TC 2.A.3]
  
 
* '''Paralogous protein(s):''' [[AapA]], [[GabP]], [[HutM]], [[RocC]], [[RocE]], [[YbgF]], [[YbxG]], [[YtnA]], [[YvbW]]
 
* '''Paralogous protein(s):''' [[AapA]], [[GabP]], [[HutM]], [[RocC]], [[RocE]], [[YbgF]], [[YbxG]], [[YtnA]], [[YvbW]]

Revision as of 18:44, 28 November 2013

  • Description: similar to amino acid permease

Gene name ydgF
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ydgF
MW, pI 50 kDa, 9.337
Gene length, protein length 1374 bp, 458 aa
Immediate neighbours vmlR, dinB
Sequences Protein DNA DNA_with_flanks
Genetic context
YdgF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdgF expression.png















Categories containing this gene/protein

transporters/ other, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU05620

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References