Difference between revisions of "YdiG"

From SubtiWiki
Jump to: navigation, search
Line 74: Line 74:
 
* '''Kinetic information:'''
 
* '''Kinetic information:'''
  
* '''Domains:'''  
+
* '''[[Domains]]:'''  
  
 
* '''Modification:'''
 
* '''Modification:'''
  
* '''Cofactor(s):'''
+
* '''[[Cofactors]]:'''
  
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
Line 104: Line 104:
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=moaC_646582_647094_1 ydiG] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=moaC_646582_647094_1 ydiG] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
+
* '''[[Sigma factor]]:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
Line 131: Line 131:
  
 
=References=
 
=References=
 +
== Reviews ==
 +
<pubmed> 23539623 </pubmed>
 +
== Original publications ==
 
<pubmed> 10903949  22383849</pubmed>
 
<pubmed> 10903949  22383849</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 12:26, 19 March 2014

  • Description: molybdenum cofactor biosynthesis protein

Gene name ydiG
Synonyms
Essential no
Product molybdenum cofactor biosynthesis protein
Function unknown
Gene expression levels in SubtiExpress: ydiG
MW, pI 18 kDa, 6.222
Gene length, protein length 510 bp, 170 aa
Immediate neighbours ydiF, rex
Sequences Protein DNA DNA_with_flanks
Genetic context
YdiG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdiG expression.png















Categories containing this gene/protein

biosynthesis of cofactors

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU05960

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • involved in the first step of molybdenum cofactor biosynthesis (together with MoaA)
  • Protein family: moaC family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure: 1EKR (the protein from E. coli, 51% identity, 78% similarity) PubMed
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Ralf R Mendel
The molybdenum cofactor.
J Biol Chem: 2013, 288(19);13165-72
[PubMed:23539623] [WorldCat.org] [DOI] (I p)

Original publications