Difference between revisions of "SsbB"
| Line 82: | Line 82: | ||
* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
| + | ** forms tetramers {{PubMed|22373918}} | ||
** [[SsbB]]-[[ComFA]] {{PubMed|17630974}} | ** [[SsbB]]-[[ComFA]] {{PubMed|17630974}} | ||
** [[SsbB]]-[[CoiA]] {{PubMed|17630974}} | ** [[SsbB]]-[[CoiA]] {{PubMed|17630974}} | ||
| Line 87: | Line 88: | ||
** [[SsbB]]-[[RecA]] {{PubMed|17630974}} | ** [[SsbB]]-[[RecA]] {{PubMed|17630974}} | ||
| − | * '''[[Localization]]:''' localizes to cell poles in competent cells [http://www.ncbi.nlm.nih.gov/pubmed/16009133 PubMed] | + | * '''[[Localization]]:''' |
| + | ** localizes to cell poles in competent cells [http://www.ncbi.nlm.nih.gov/pubmed/16009133 PubMed] | ||
=== Database entries === | === Database entries === | ||
| − | * '''Structure:''' | + | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?structureId= 3VDY 3VDY] (in complex with ssDNA) {{PubMed|22373918}} |
* '''UniProt:''' [http://www.uniprot.org/uniprot/C0SPB6 C0SPB6] | * '''UniProt:''' [http://www.uniprot.org/uniprot/C0SPB6 C0SPB6] | ||
Revision as of 12:42, 6 March 2012
- Description: single-strand DNA-binding protein
| Gene name | ssbB |
| Synonyms | ywpH |
| Essential | no |
| Product | single-strand DNA-binding protein |
| Function | required for efficient genetic transformation |
| Interactions involving this protein in SubtInteract: SsbB | |
| MW, pI | 12 kDa, 6.876 |
| Gene length, protein length | 339 bp, 113 aa |
| Immediate neighbours | glcR, ywpG |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
DNA replication, DNA repair/ recombination
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU36310
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): SsbA
Extended information on the protein
- Kinetic information:
- Domains:
- Cofactor(s):
- Effectors of protein activity: phosphorylation strongly increases DNA-binding activity PubMed
- Localization:
- localizes to cell poles in competent cells PubMed
Database entries
- UniProt: C0SPB6
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- expressed at the onset of stationary phase PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector: for expression, purification in E. coli with N-terminal His-tag, pRSETA available in Gerth lab
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
