Difference between revisions of "SpoIVCA"
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* '''Operon:''' ''spoIVCA'' {{PubMed|2105293}} | * '''Operon:''' ''spoIVCA'' {{PubMed|2105293}} | ||
− | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIVCA_2653371_2654873_-1 spoIVCA] {{PubMed|22383849}} |
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+ | * '''Sigma factor:''' [[SigE]] {{PubMed|15699190,2105293}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
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** [[SpoIIID]]: transcription activation {{PubMed|7966271}} | ** [[SpoIIID]]: transcription activation {{PubMed|7966271}} | ||
− | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = |
Revision as of 11:47, 16 April 2012
- Description: site-specific DNA recombinase required for creating the sigK gene (excision of the skin element)
Gene name | spoIVCA |
Synonyms | cisA |
Essential | no |
Product | site-specific DNA recombinase |
Function | excision of the skin element, creation of the sigK gene |
MW, pI | 57 kDa, 9.498 |
Gene length, protein length | 1500 bp, 500 aa |
Immediate neighbours | spoIVCB, arsC |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
DNA repair/ recombination, sigma factors and their control, sporulation proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU25770
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P17867
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: spoIVCA PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
R Halberg, L Kroos
Sporulation regulatory protein SpoIIID from Bacillus subtilis activates and represses transcription by both mother-cell-specific forms of RNA polymerase.
J Mol Biol: 1994, 243(3);425-36
[PubMed:7966271]
[WorldCat.org]
[DOI]
(P p)
B Kunkel, R Losick, P Stragier
The Bacillus subtilis gene for the development transcription factor sigma K is generated by excision of a dispensable DNA element containing a sporulation recombinase gene.
Genes Dev: 1990, 4(4);525-35
[PubMed:2163341]
[WorldCat.org]
[DOI]
(P p)
T Sato, Y Samori, Y Kobayashi
The cisA cistron of Bacillus subtilis sporulation gene spoIVC encodes a protein homologous to a site-specific recombinase.
J Bacteriol: 1990, 172(2);1092-8
[PubMed:2105293]
[WorldCat.org]
[DOI]
(P p)
B Kunkel, K Sandman, S Panzer, P Youngman, R Losick
The promoter for a sporulation gene in the spoIVC locus of Bacillus subtilis and its use in studies of temporal and spatial control of gene expression.
J Bacteriol: 1988, 170(8);3513-22
[PubMed:2841290]
[WorldCat.org]
[DOI]
(P p)