Difference between revisions of "YfjN"

From SubtiWiki
Jump to: navigation, search
(Expression and regulation)
Line 88: Line 88:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''yfjN'' (according to [http://dbtbs.hgc.jp/COG/prom/yfjN.html DBTBS])
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
Line 96: Line 96:
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 18:48, 31 August 2009

  • Description: putative tRNA-dihydrouridine synthase 2

Gene name yfjN
Synonyms dusC
Essential no
Product putative tRNA-dihydrouridine synthase 2
Function tRNA modification
MW, pI 36 kDa, 5.376
Gene length, protein length 975 bp, 325 aa
Immediate neighbours yfjO, yfjM
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YfjN context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU08030

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: dus family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: yfjN (according to DBTBS)
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References