Difference between revisions of "NcRNA"

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* 6.10. [[Pseudogenes]]
 
* 6.10. [[Pseudogenes]]
 
|Related=
 
|Related=
none
+
* [[RNA switch]]
 +
* [[RNase]]
 
|}}
 
|}}
  
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* ''[[bsrA]]''
 
* ''[[bsrA]]''
 
* ''[[bsrB]]''
 
* ''[[bsrB]]''
=Back to [[categories]]=
+
 
 
'''tmRNA'''
 
'''tmRNA'''
  
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* ''[[fsrA]]''
 
* ''[[fsrA]]''
 +
* ''[[roxS]]''
 +
* ''[[rrcM]]''
 +
* [[sr1]]
 +
* [[SR4]]
 +
* [[RnaC]]
 +
 +
'''antisense RNAs of toxin/antitoxin systems'''
 
* ''[[ratA]]''
 
* ''[[ratA]]''
* [[sr1]]
+
* ''[[as-bsrH]]''
 +
* ''[[as-yonT]]''
 +
* ''[[SR5]]''
  
 
'''small RNAs with unknown functions'''
 
'''small RNAs with unknown functions'''
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* ''[[bsrC]]''
 
* ''[[bsrC]]''
 
* ''[[bsrD]]''
 
* ''[[bsrD]]''
* ''[[bsrE]]''
 
 
* ''[[bsrF]]''
 
* ''[[bsrF]]''
* ''[[bsrG]]''
 
 
* ''[[bsrH]]''
 
* ''[[bsrH]]''
 
* ''[[bsrI]]''
 
* ''[[bsrI]]''
* ''[[rsmY]]''
+
* ''[[csfG]]''
* ''[[surA]]''
+
* ''[[surA]]'' (for ''[[yndL]]'')
 
* ''[[surC]]''
 
* ''[[surC]]''
 +
 +
'''Antisense RNAs were predicted for the following genes:''' {{PubMed|20525796}}
 +
* ''[[bglP]]''
 +
* ''[[comER]]''
 +
* ''[[ggaA]]''
 +
* ''[[jag]]''
 +
* ''[[leuA]]''
 +
* ''[[mbl]]''
 +
* ''[[mtlD]]''
 +
* ''[[mutS]]''
 +
* ''[[nadB]]''
 +
* ''[[ndoA]]''
 +
* ''[[opuBD]]''
 +
* ''[[sda]]''
 +
* ''[[sigA]]''
 +
* ''[[wprA]]''
 +
* ''[[yddR]]''
 +
* ''[[ydiF]]''
 +
* ''[[yfhD]]''
 +
* ''[[yndL]]'' (''[[surA]]'')
 +
* ''[[yoeA]]''
 +
* ''[[yoqZ]]''
 +
* ''[[yqzJ]]''
 +
* ''[[ytoA]]''
 +
* ''[[ytoI]]''
 +
* ''[[ywfM]]''
 +
* ''[[ywqA]]''
 +
* ''[[yyaQ]]''
 +
 +
'''Additional noncoding RNAs were predicted for the following intergenic regions:''' {{PubMed|20525796}}
 +
* ''[[yqaJ]]''-''[[yqaI]]''
 +
* ''[[yqaO]]''-''[[yqaN]]''
 +
* ''[[yndN]]''-''[[lexA]]''
 +
* ''[[ydcO]]''-''[[ydcP]]''
 +
* ''[[yolA]]''-''[[yokL]]''
 +
* ''[[yokC]]''-''[[yokB]]''
 +
* ''[[pbpG]]''-''[[ywhD]]''
 +
* ''[[stoA]]''-''[[zosA]]''
 +
* ''[[yobI]]''-''[[yobJ]]''
 +
* ''[[vmlR]]''-''[[ydgF]]''
 +
* ''[[yrzI]]''-''[[yrhG]]''
 +
* ''[[yfmI]]''-''[[yfmG]]''
 +
* ''[[hxlR]]''-''[[srfAA]]''
 +
* ''[[mutL]]''-''[[ymzD]]''
 +
* ''[[mntA]]''-''[[menC]]''
 +
* ''[[yopM]]''-''[[yopL]]''
 +
* ''[[yizD]]''-''[[yjbH]]''
 +
* ''[[pps]]''-''[[xynA]]''
 +
* ''[[yqdB]]''-''[[yqbM]]''
 +
* ''[[yugI]]''-''[[alaT]]''
 +
* ''[[trxA]]''-''[[xsa]]''
 +
* ''[[ykwD]]''-''[[pbpH]]''
 +
* ''[[ymzA]]''-''[[nrdI]]''
 +
* ''[[yvcI]]''-''[[trxB]]''
 +
* ''[[glmM]]''-''[[glmS]]''
 +
* ''[[yhaZ]]''-''[[yhaX]]''
 +
* ''[[yneK]]''-''[[cotM]]''
 +
* ''[[trpS]]''-''[[oppA]]''
 +
* ''[[gerPA]]''-''[[yisI]]''
  
 
==Reviews==
 
==Reviews==
<pubmed> 19239884 19207102 20525796 19859665</pubmed>
+
<pubmed> 19239884 19207102 20525796 19859665 21646430 22827307 24576839 25808661 27784798</pubmed>
 +
 
 +
==Important original publications==
 +
<pubmed>22383849</pubmed>
 +
=Back to [[categories]]=

Latest revision as of 15:40, 28 October 2016

Parent category
Neighbouring categories
Related categories




6S RNA

tmRNA

small cytoplasmatic RNA (protein secretion)

RNA component of RNase P

regulatory RNAs

antisense RNAs of toxin/antitoxin systems

small RNAs with unknown functions

Antisense RNAs were predicted for the following genes: PubMed

Additional noncoding RNAs were predicted for the following intergenic regions: PubMed

Reviews


Important original publications

Back to categories