Difference between revisions of "SpoIID"

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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU36750 spoIID]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU36750 spoIID]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/SpoIID SpoIID]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=SpoIID SpoIID]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 37 kDa, 9.764   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 37 kDa, 9.764   

Revision as of 09:32, 12 November 2013

  • Description: cell wall hydrolase (lytic transglycosylase), required for complete dissolution of the asymmetric septum

Gene name spoIID
Synonyms spoIIC
Essential no
Product lytic transglycosylase
Function dissolution of the septal cell wall
Gene expression levels in SubtiExpress: spoIID
Interactions involving this protein in SubtInteract: SpoIID
MW, pI 37 kDa, 9.764
Gene length, protein length 1029 bp, 343 aa
Immediate neighbours ywmC, murAA
Sequences Protein DNA DNA_with_flanks
Genetic context
SpoIID context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpoIID expression.png















Categories containing this gene/protein

cell wall/ other, sporulation proteins, membrane proteins

This gene is a member of the following regulons

SigE regulon, SpoIIID regulon

The gene

Basic information

  • Locus tag: BSU36750

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • degrades the glycan strands of the peptidoglycan into disaccharide units PubMed, enhances SpoIIP activity PubMed
    • required for proper localization of SpoIIQ (together with SpoIIP) PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Lotte Søgaard-Andersen
Stably bridging a great divide: localization of the SpoIIQ landmark protein in Bacillus subtilis.
Mol Microbiol: 2013, 89(6);1019-24
[PubMed:23944268] [WorldCat.org] [DOI] (I p)

Original publications