Difference between revisions of "SpoIID"
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=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
| − | * '''Catalyzed reaction/ biological activity:''' degrades the glycan strands of the peptidoglycan into disaccharide units {{PubMed|20159959}}, enhances [[SpoIIP]] activity {{PubMed|20159959}} | + | * '''Catalyzed reaction/ biological activity:''' |
| + | ** degrades the glycan strands of the peptidoglycan into disaccharide units {{PubMed|20159959}}, enhances [[SpoIIP]] activity {{PubMed|20159959}} | ||
| + | ** required for proper localization of [[SpoIIQ]] (together with [[SpoIIP]]) {{PubMed|23834622}} | ||
* '''Protein family:''' | * '''Protein family:''' | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIID_3776722_3777753_-1 spoIID] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIID_3776722_3777753_-1 spoIID] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigE]] {{PubMed|15699190}} | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}} |
* '''Regulation:''' | * '''Regulation:''' | ||
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=References= | =References= | ||
| − | <pubmed>17376078,1946462,11886548,15752199 3011962 15699190, 15383836 20159959 20382772 20444098 </pubmed> | + | <pubmed>17376078,1946462,11886548,15752199 3011962 15699190, 15383836 20159959 20382772 20444098 23834622</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 10:37, 10 July 2013
- Description: cell wall hydrolase (lytic transglycosylase), required for complete dissolution of the asymmetric septum
| Gene name | spoIID |
| Synonyms | spoIIC |
| Essential | no |
| Product | lytic transglycosylase |
| Function | dissolution of the septal cell wall |
| Gene expression levels in SubtiExpress: spoIID | |
| Interactions involving this protein in SubtInteract: SpoIID | |
| MW, pI | 37 kDa, 9.764 |
| Gene length, protein length | 1029 bp, 343 aa |
| Immediate neighbours | ywmC, murAA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
cell wall/ other, sporulation proteins, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU36750
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane PubMed
Database entries
- Structure:
- UniProt: P07372
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: spoIID PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
