Difference between revisions of "SpoIID"
Line 37: | Line 37: | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
− | |||
− | |||
− | |||
− | |||
<br/><br/> | <br/><br/> | ||
Line 75: | Line 71: | ||
=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
− | * '''Catalyzed reaction/ biological activity:''' degrades the glycan strands of the peptidoglycan into disaccharide units {{PubMed|20159959}}, enhances [[SpoIIP]] activity {{PubMed|20159959}} | + | * '''Catalyzed reaction/ biological activity:''' |
+ | ** degrades the glycan strands of the peptidoglycan into disaccharide units {{PubMed|20159959}}, enhances [[SpoIIP]] activity {{PubMed|20159959}} | ||
+ | ** required for proper localization of [[SpoIIQ]] (together with [[SpoIIP]]) {{PubMed|23834622}} | ||
* '''Protein family:''' | * '''Protein family:''' | ||
Line 115: | Line 113: | ||
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIID_3776722_3777753_-1 spoIID] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIID_3776722_3777753_-1 spoIID] {{PubMed|22383849}} | ||
− | * '''Sigma factor:''' [[SigE]] {{PubMed|15699190}} | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}} |
* '''Regulation:''' | * '''Regulation:''' | ||
Line 145: | Line 143: | ||
=References= | =References= | ||
− | <pubmed>17376078,1946462,11886548,15752199 3011962 15699190, 15383836 20159959 20382772 20444098 </pubmed> | + | <pubmed>17376078,1946462,11886548,15752199 3011962 15699190, 15383836 20159959 20382772 20444098 23834622</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 10:37, 10 July 2013
- Description: cell wall hydrolase (lytic transglycosylase), required for complete dissolution of the asymmetric septum
Gene name | spoIID |
Synonyms | spoIIC |
Essential | no |
Product | lytic transglycosylase |
Function | dissolution of the septal cell wall |
Gene expression levels in SubtiExpress: spoIID | |
Interactions involving this protein in SubtInteract: SpoIID | |
MW, pI | 37 kDa, 9.764 |
Gene length, protein length | 1029 bp, 343 aa |
Immediate neighbours | ywmC, murAA |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
cell wall/ other, sporulation proteins, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU36750
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane PubMed
Database entries
- Structure:
- UniProt: P07372
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: spoIID PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Christopher D A Rodrigues, Kathleen A Marquis, Jeffrey Meisner, David Z Rudner
Peptidoglycan hydrolysis is required for assembly and activity of the transenvelope secretion complex during sporulation in Bacillus subtilis.
Mol Microbiol: 2013, 89(6);1039-52
[PubMed:23834622]
[WorldCat.org]
[DOI]
(I p)
Pablo Meyer, Jennifer Gutierrez, Kit Pogliano, Jonathan Dworkin
Cell wall synthesis is necessary for membrane dynamics during sporulation of Bacillus subtilis.
Mol Microbiol: 2010, 76(4);956-70
[PubMed:20444098]
[WorldCat.org]
[DOI]
(I p)
Jennifer Gutierrez, Rachelle Smith, Kit Pogliano
SpoIID-mediated peptidoglycan degradation is required throughout engulfment during Bacillus subtilis sporulation.
J Bacteriol: 2010, 192(12);3174-86
[PubMed:20382772]
[WorldCat.org]
[DOI]
(I p)
Cecile Morlot, Tsuyoshi Uehara, Kathleen A Marquis, Thomas G Bernhardt, David Z Rudner
A highly coordinated cell wall degradation machine governs spore morphogenesis in Bacillus subtilis.
Genes Dev: 2010, 24(4);411-22
[PubMed:20159959]
[WorldCat.org]
[DOI]
(I p)
Arnaud Chastanet, Richard Losick
Engulfment during sporulation in Bacillus subtilis is governed by a multi-protein complex containing tandemly acting autolysins.
Mol Microbiol: 2007, 64(1);139-52
[PubMed:17376078]
[WorldCat.org]
[DOI]
(P p)
Thierry Doan, Kathleen A Marquis, David Z Rudner
Subcellular localization of a sporulation membrane protein is achieved through a network of interactions along and across the septum.
Mol Microbiol: 2005, 55(6);1767-81
[PubMed:15752199]
[WorldCat.org]
[DOI]
(P p)
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
Patrick Eichenberger, Masaya Fujita, Shane T Jensen, Erin M Conlon, David Z Rudner, Stephanie T Wang, Caitlin Ferguson, Koki Haga, Tsutomu Sato, Jun S Liu, Richard Losick
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.
PLoS Biol: 2004, 2(10);e328
[PubMed:15383836]
[WorldCat.org]
[DOI]
(I p)
P Eichenberger, P Fawcett, R Losick
A three-protein inhibitor of polar septation during sporulation in Bacillus subtilis.
Mol Microbiol: 2001, 42(5);1147-62
[PubMed:11886548]
[WorldCat.org]
[DOI]
(P p)
A Driks, R Losick
Compartmentalized expression of a gene under the control of sporulation transcription factor sigma E in Bacillus subtilis.
Proc Natl Acad Sci U S A: 1991, 88(22);9934-8
[PubMed:1946462]
[WorldCat.org]
[DOI]
(P p)
I Lopez-Diaz, S Clarke, J Mandelstam
spoIID operon of Bacillus subtilis: cloning and sequence.
J Gen Microbiol: 1986, 132(2);341-54
[PubMed:3011962]
[WorldCat.org]
[DOI]
(P p)