Difference between revisions of "HlpB"

From SubtiWiki
Jump to: navigation, search
(Categories containing this gene/protein)
Line 7: Line 7:
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yisB ''
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yisB ''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
+
|style="background:#ABCDEF;" align="center"| '''Essential''' || yes {{PubMed|22984257}}
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Product''' || HNH nuclease-like protein  
 
|style="background:#ABCDEF;" align="center"| '''Product''' || HNH nuclease-like protein  
Line 50: Line 50:
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
 
+
* essential, the mutation can be suppressed by second-site mutations in ''[[addA]]'' or ''[[addB]]'' {{PubMed|22984257}}
 
=== Database entries ===
 
=== Database entries ===
  

Revision as of 15:29, 21 September 2012

  • Description: HNH nuclease-like protein, rescues AddA-AddB-mediated recombination intermediates

Gene name hlpB
Synonyms yisB
Essential yes PubMed
Product HNH nuclease-like protein
Function rescuing of AddA-AddB-mediated recombination intermediates
Gene expression levels in SubtiExpress: yisB
MW, pI 11 kDa, 9.941
Gene length, protein length 300 bp, 100 aa
Immediate neighbours sbcC, gerPF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YisB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YisB expression.png















Categories containing this gene/protein

DNA repair/ recombination, essential genes

This gene is a member of the following regulons

ComK regulon

The gene

Basic information

  • Locus tag: BSU10660

Phenotypes of a mutant

  • essential, the mutation can be suppressed by second-site mutations in addA or addB PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References