Difference between revisions of "BioW"

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|colspan="2" | '''Genetic context''' <br/> [[Image:bioW_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:bioW_context.gif]]
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=bioW_3094679_3095455_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:bioW_expression.png|500px]]
 
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Revision as of 11:25, 20 April 2012

  • Description: 6-carboxyhexanoate-CoA ligase

Gene name bioW
Synonyms
Essential no
Product 6-carboxyhexanoate-CoA ligase)
Function biosynthesis of biotin
Metabolic function and regulation of this protein in SubtiPathways:
Biotin
MW, pI 29 kDa, 5.548
Gene length, protein length 777 bp, 259 aa
Immediate neighbours bioA, ytaP
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
BioW context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
BioW expression.png
























Categories containing this gene/protein

biosynthesis of cofactors

This gene is a member of the following regulons

BirA regulon

The gene

Basic information

  • Locus tag: BSU30240

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + 6-carboxyhexanoate + CoA = AMP + diphosphate + 6-carboxyhexanoyl-CoA (according to Swiss-Prot)
  • Protein family: bioW family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed in the presence of biotin (BirA) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews: PubMed

Original publications