Difference between revisions of "SubtInteract"
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==Visualization of protein-protein interactions in ''B. subtilis''== | ==Visualization of protein-protein interactions in ''B. subtilis''== | ||
− | * | + | * [http://cellpublisher.gobics.de/subtinteract/startpage/start/ interactive protein-protein interaction map] |
* the beta version of [http://subtiwiki.uni-goettingen.de/pathways/SubtInteract/demo_mitlinks/ SubtInteract] | * the beta version of [http://subtiwiki.uni-goettingen.de/pathways/SubtInteract/demo_mitlinks/ SubtInteract] | ||
Revision as of 20:31, 27 April 2011
Protein-protein interactions are essential for many activities of any living cell. These interactions involve multi-protein complexes that take part in central processes such as DNA replication, transcription or translation. Protein-protein interactions may also be involved in a variety of regulatory events. Metabolic enzymes do often form transien complexes that represent a complete pathways. These complexes are called metabolon. Finally, many interactions may be of a transient nature.
Contents
- 1 Methods to detect protein-protein interactions
- 2 Visualization of protein-protein interactions in B. subtilis
- 3 Protein complexes in B. subtilis
- 3.1 DNA replication: the replisome
- 3.2 transcription: RNA polymerase
- 3.3 translation: the ribosome
- 3.4 synthesis of glutamyl-tRNA(Gln): the transamidosome (GatA-GatB-GatC)-GltX-trnS-Gln
- 3.5 RNA processing and degradation: the RNA degradosome
- 3.6 general stress response: the stressosome
- 3.7 cell division: the divisome
- 3.8 DNA uptake: the pseudopilus PubMed
- 3.9 metabolism: the metabolons of glycolysis and the TCA cycle PubMed
- 4 Important publications
Methods to detect protein-protein interactions
- Yeast Two Hybrid System PubMed
- TAP-Tag purification PubMed
Attention: Each technique detects only about 33% of all interactions PubMed
Visualization of protein-protein interactions in B. subtilis
- interactive protein-protein interaction map
- the beta version of SubtInteract
Protein complexes in B. subtilis
DNA replication: the replisome
transcription: RNA polymerase
translation: the ribosome
synthesis of glutamyl-tRNA(Gln): the transamidosome (GatA-GatB-GatC)-GltX-trnS-Gln
RNA processing and degradation: the RNA degradosome
general stress response: the stressosome
cell division: the divisome
DNA uptake: the pseudopilus PubMed
metabolism: the metabolons of glycolysis and the TCA cycle PubMed
Important publications