yrpC

yrpC
168

glutamate racemase

Locus
BSU_26810
Molecular weight
29.73 kDa
Isoelectric point
6.74
Protein length
265 aaSequenceBlast
Gene length
798 bpSequenceBlast
Function
peptidoglycan precursor biosynthesis
Product
glutamate racemase
Essential
no
E.C.
5.1.1.3
Synonyms
yrpC
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0796 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,738,308 → 2,739,105
The protein
Catalyzed reaction/ biological activity
L-glutamate --> D-glutamate (according to UniProt)
Protein family
aspartate/glutamate racemases family (with RacE and RacX, according to UniProt)
Structure
2JFN (PDB) (from Escherichia coli, 36% identity, 54% similarity) PubMed
O05412 (AlphaFold)
Paralogous protein(s)
RacE
Expression and Regulation
Operons
Genes
yrpC
Description
PubMed
Regulation
expressed only in minimal medium, not in complex medium PubMed
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yrpC

2025-03-02 00:25:39

ghost

80

b4ec43d91b5f58377af4a536c4c00f3652e1dd55

F17EDDC1025D199F657E1E5D7F95943948F81971

Biological materials
Mutant
MGNA-A867 (yrpC::erm), available at the NBRP B. subtilis, Japan
BKE26810 (ΔyrpC::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATCACTTCTCACGCTTTCT,  downstream forward: _UP4_TGAATGTAAATGAAAAAGAC
BKK26810 (ΔyrpC::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATCACTTCTCACGCTTTCT,  downstream forward: _UP4_TGAATGTAAATGAAAAAGAC
References
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Page visits: 2512

Time of last update: 2025-04-27 10:46:39

Author of last update: Melvin.boenninger