Potential protein homologs
Description
The following list presents the potential protein homologs for RpmEB using FASTA alignment tool. For all top hits, a bidirectional analysis was performed and those showing the same pair of proteins are considered to be potential orthologs.
The column Best hit bidirectional informs if RpmEB was found to be best hit in the alignment with the protein of the respective organism.
RpmEB
| Organism | Protein name | Identity | Similarity | Bidirectional best hit |
| Bacillus licheniformis | RpmE2 | 87.5% | 97.5% | Yes |
| Bacillus anthracis | RpmE2 | 66.2% | 87.5% | Yes |
| Listeria monocytogenes | RpmE2 | 55.0% | 83.8% | Yes |
| Staphylococcus aureus | RpmE2 | 60.0% | 87.5% | Yes |
| Lactococcus lactis | RpmE2 | 60.3% | 89.7% | Yes |
| Streptococcus pneumoniae | RpmE2 | 60.0% | 90.0% | Yes |
| Streptococcus pyogenes | RpmE | 57.5% | 88.8% | Yes |
| Clostridium acetobutylicum | RpmE | 35.0% | 57.5% | No |
| Mycoplasma pneumoniae | No significant homolog | No significant homolog | ||
| JCVI-syn3A | JCVISYN3A_0137 | 44.4% | 75.6% | No |
| Corynebacterium glutamicum | RpmE2 | 51.3% | 84.6% | Yes |
| Streptomyces coelicolor | RpmE2-2 | 53.8% | 79.5% | Yes |
| Escherichia coli | YkgM | 38.5% | 65.4% | Yes |
| Synechocystis sp. | RpmE | 51.2% | 78.0% | No |
| Synechococcus elongatus | RpmE | 51.2% | 75.6% | No |
| Borrelia burgdorferi | RpmE2 | 50.0% | 82.1% | Yes |