Potential protein homologs

Potential protein homologs

Description

The following list presents the potential protein homologs for Hfq using FASTA alignment tool. For all top hits, a bidirectional analysis was performed and those showing the same pair of proteins are considered to be potential orthologs.
The column Best hit bidirectional informs if Hfq was found to be best hit in the alignment with the protein of the respective organism.

Hfq

OrganismProtein nameIdentitySimilarityBidirectional
best hit
Bacillus licheniformisHfq95.9%98.6%Yes
Bacillus anthracisHfq85.7%98.6%Yes
Listeria monocytogenesHfq72.3%89.2%Yes
Staphylococcus aureusHfq49.3%84.1%Yes
Lactococcus lactis No significant homolog No significant homolog
Streptococcus pneumoniae No significant homolog No significant homolog
Streptococcus pyogenes No significant homolog No significant homolog
Clostridium acetobutylicumHfq59.4%87.5%Yes
Mycoplasma pneumoniae No significant homolog No significant homolog
JCVI-syn3A No significant homolog No significant homolog
Corynebacterium glutamicum No significant homolog No significant homolog
Streptomyces coelicolor No significant homolog No significant homolog
Escherichia coliHfq45.3%87.5%Yes
Synechocystis sp. No significant homolog No significant homolog
Synechococcus elongatus No significant homolog No significant homolog
Borrelia burgdorferi No significant homolog No significant homolog