ytlC
168
similar to anion transport [wiki|ABC transporter] ([metabolite|ATP]-binding protein)
locus
BSU_30610
Molecular weight
29.15 kDa
pI
5.43
function
unknown
product
[wiki|ABC transporter] (ATP-binding protein)
essential
no
synonyms
ytlC
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1116 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,133,387 3,134,169
The protein
Protein family
[wiki|ABC transporter superfamily] (according to UniProt)
[wiki|Domains]
[wiki|ABC transporter domain] (aa 4-231) (according to UniProt)
Structure
[PDB|1Z47] (ATP-binding subunit of sulfate [wiki|ABC transporter] of Alicyclobacillus acidocaldarius, 39% identity) [pubmed|15893314]
[AF|O34314]
Paralogous protein(s)
[protein|675CE0BCA393E9C2795032F1C0FDE6AF08B77033|ssuB]
Expression and Regulation
Operons
genes
[gene|56E482D9CAC6E350140FD21A1C4AC8820B918CDA|ytlA]-[gene|3DC6A032B0F076A460FE2C3244D747CFC7583FE7|ytlC]-[gene|2768A088A2902FA776CB656F29A6F4B0C9E69CA7|ytlD]
description
[Pubmed|9387221]
regulation
expressed late during sporulation in the mother cell ([protein|search|SigK]) [Pubmed|15699190,15383836]
sigma factors
[protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|sigK]: sigma factor, [Pubmed|15699190,15383836], in [regulon|protein:24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|sigK regulon]
Biological materials
Mutant
MGNA-A299 (ytlC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/299 NBRP B. subtilis, Japan]
BKE30610 ([gene|3DC6A032B0F076A460FE2C3244D747CFC7583FE7|ytlC]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE30610 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TAAGAAAGACATAGATGGCG, downstream forward: _UP4_ACGATATGGAAGGAGCTGAA
BKK30610 ([gene|3DC6A032B0F076A460FE2C3244D747CFC7583FE7|ytlC]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK30610 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TAAGAAAGACATAGATGGCG, downstream forward: _UP4_ACGATATGGAAGGAGCTGAA
References
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Time of last update: 2024-12-20 17:19:06
Author of last update: Jstuelk