RpsF

• Description: ribosomal protein
  
  

Gene name	rpsF
Synonyms
Essential	no PubMed
Product	ribosomal protein S6 (BS9)
Function	translation
Gene expression levels in SubtiExpress: rpsF
Interactions involving this protein in SubtInteract: RpsF
MW, pI	10 kDa, 4.993
Gene length, protein length	285 bp, 95 aa
Immediate neighbours	ssbA, yyaF
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

translation, most abundant proteins

This gene is a member of the following regulons

ComK regulon, stringent response

The gene

Basic information

• Locus tag: BSU40910

Database entries

• BsubCyc: BSU40910

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: ribosomal protein S6P family (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactors:

• Effectors of protein activity:

• Interactions:
  • RpsF-RpsR, the heterodimer binds the structure in the rpsF mRNA 5' UTR PubMed

• Localization:

Database entries

• BsubCyc: BSU40910

• Structure: 3R3T (from Bacillus anthracis, 71% identity, 97% similarity)

• UniProt: P21468

• KEGG entry: [3]

• E.C. number:

Expression and regulation

• Operon:
  • yyaF-rpsF-ssbA-rpsR PubMed
  • rpsF-ssbA-rpsR PubMed

• Expression browser: rpsF PubMed

• Sigma factor:
  • rpsF: SigA PubMed

• Regulation:
  • RelA dependent downregulation (Class I) during stringent response PubMed
  • ComK: transcription activation PubMed

• Additional information:
  • the mRNA contains a structured motif in the 5' UTR upstream of the rpsF ORF that is bound by RpsF-RpsR heterodimers and may be implicated in autogenous regulation PubMed
  • belongs to the 100 most abundant proteins PubMed
  • number of protein molecules per cell (minimal medium with glucose and ammonium): 3469 PubMed
  • number of protein molecules per cell (complex medium with amino acids, without glucose): 4039 PubMed

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody: