PdaA

From SubtiWiki
Revision as of 18:41, 12 January 2014 by Jstuelk (talk | contribs) (Basic information/ Evolution)
Jump to: navigation, search
  • Description: N-acetylmuramic acid deacetylase, spore cortex peptidoglycan synthesis

Gene name pdaA
Synonyms yfjS
Essential no
Product N-acetylmuramic acid deacetylase
Function spore cortex peptidoglycan synthesis
Gene expression levels in SubtiExpress: pdaA
MW, pI 29 kDa, 7.318
Gene length, protein length 789 bp, 263 aa
Immediate neighbours yfjT, yfjR
Sequences Protein DNA DNA_with_flanks
Genetic context
YfjS context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
PdaA expression.png















Categories containing this gene/protein

cell wall/ other, sporulation proteins

This gene is a member of the following regulons

SigG regulon

The gene

Basic information

  • Locus tag: BSU07980

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • de-N-acetylation of N-acetylglucosamine and N-acetyl-muramic acid for spore cortex peptidoglycan PubMed
  • Protein family: polysaccharide deacetylase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: expressed late during sporulation in the forespore (SigG) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References