YxaB

• Description: general stress protein, putative exopolysaccaride synthase, important for biofilm formation
  
  

Gene name	yxaB
Synonyms
Essential	no
Product	putative exopolysaccaride synthase
Function	biofilm formation, survival of salt and ethanol stress
Gene expression levels in SubtiExpress: yxaB
MW, pI	39 kDa, 4.525
Gene length, protein length	1029 bp, 343 aa
Immediate neighbours	yxaC, yxaA
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

biofilm formation, general stress proteins (controlled by SigB), poorly characterized/ putative enzymes

This gene is a member of the following regulons

AbrB regulon, SigB regulon

The gene

Basic information

• Locus tag: BSU40030

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: polysaccharide pyruvyl transferase family (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: P42101

• KEGG entry: [3]

• E.C. number:

Expression and regulation

• Operon:
  • yxaA-yxaB PubMed
  • yxaB PubMed

• Expression browser: yxaB PubMed

• Sigma factor:
  • yxaA: SigA PubMed
  • yxaB: SigB PubMed

• Regulation: induced by stress (SigB) PubMed
  • repressed during logrithmic growth (AbrB) PubMed

• Regulatory mechanism:
  • AbrB: transcription repression PubMed

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Additional publications: PubMed

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)

Ken-Ichi Yoshida, Izumi Ishio, Eishi Nagakawa, Yoshiyuki Yamamoto, Mami Yamamoto, Yasutaro Fujita
Systematic study of gene expression and transcription organization in the gntZ-ywaA region of the Bacillus subtilis genome.
Microbiology (Reading): 2000, 146 ( Pt 3);573-579
[PubMed:10746760] [WorldCat.org] [DOI] (P p)