File:Overview on the categories.xls
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An overview in Excel of all categories in SubtiWiki, without the genes in each category.
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| Date/Time | Dimensions | User | Comment | |
|---|---|---|---|---|
| current | 19:17, 30 May 2011 | (46 KB) | Jstuelk (talk | contribs) | An overview in Excel of all categories in SubtiWiki, without the genes in each category, as of June 01, 2011. |
| 21:18, 9 December 2010 | (45 KB) | WikiSysop (talk | contribs) | An overview in Excel of all categories in SubtiWiki, without the genes in each category. |
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- ABC transporters
- ATP synthesis
- Acid stress proteins (controlled by SigO-RsoA)
- Acquisition of iron
- Biofilm formation
- Biosynthesis/ acquisition of amino acids
- Biosynthesis/ acquisition of nucleotides
- Biosynthesis of antibacterial compounds
- Biosynthesis of cell wall components
- Biosynthesis of cofactors
- Biosynthesis of lipids
- Capsule biosynthesis and degradation
- Carbon core metabolism
- Cell division
- Cell envelope stress proteins (controlled by SigM, V, W, X, Y)
- Cell shape
- Cell wall/ other
- Cell wall degradation/ turnover
- Cell wall synthesis
- Chaperones/ protein folding
- Cold stress proteins
- Coping with hyper-osmotic stress
- Coping with hypo-osmotic stress
- DEAD-box RNA helicases
- DNA condensation/ segregation
- DNA repair/ recombination
- DNA replication
- DNA restriction/ modification
- ECF transporter
- Electron transport/ other
- Essential genes
- GTP-binding proteins
- General stress proteins (controlled by SigB)
- Genetic competence
- Genetics/ other
- Germination
- Heat shock proteins
- Iron metabolism
- Lifestyles/ miscellaneous
- Lipid metabolism/ other
- Membrane dynamics
- Membrane proteins
- Metabolism of signalling nucleotides
- Metal ion homeostasis (K, Na, Ca, Mg)
- Miscellaneous metabolic pathways
- Mobile genetic elements
- Motility and chemotaxis
- NcRNA
- Nucleotide metabolism/ other
- PBSX prophage
- PH homeostasis
- Phage-related functions
- Phosphate metabolism
- Phosphoproteins
- Phosphorelay
- Phosphotransferase systems
- Poorly characterized/ putative enzymes
- Prophage 1
- Protein modification
- Protein secretion
- Proteins of unknown function
- Proteolysis
- Pseudogenes
- Putative amino acid transporter
- Quorum sensing
- RNA binding regulators
- RNA chaperones
- RNA polymerase
- RNases
- Regulators of core metabolism
- Regulators of electron transport
- Resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)
- Resistance against oxidative and electrophile stress
- Resistance against toxic metals
- Resistance against toxins/ antibiotics
- Respiration
- Ribosomal RNA
- SP-beta prophage
- Short peptides
- Sigma factors
- Sigma factors and their control
- Skin element
- Sporulation
- Sporulation/ other
- Sulfur metabolism
- TRNA
- Toxins, antitoxins and immunity against toxins
- Trace metal homeostasis (Cu, Zn, Ni, Mn, Mo)
- Transcription
- Transcription factors and their control
- Transition state regulators
- Translation
- Transporters/ other
- Trigger enzymes
- Universally conserved proteins
- Utilization of amino acids
- Utilization of lipids
- Utilization of nitrogen sources other than amino acids
- Utilization of nucleotides
- Utilization of specific carbon sources
