YdhU/1

• Description: similar to Mn catalase, inactive pseudogene in strain 168
  
  

Gene name	ydhU/1
Synonyms	ydhU
Essential	no
Product	unknown
Function	unknown
Gene expression levels in SubtiExpress: ydhU/1
MW, pI	- , -
Gene length, protein length	729 bp, -
Immediate neighbours	gmuG, ydhU/2
Gene sequence (+200bp)	Protein sequence
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed 500px

Categories containing this gene/protein

resistance against oxidative and electrophile stress, pseudogenes

This gene is a member of the following regulons

Fur regulon

The gene

Basic information

• Locus tag: BSU05890

Phenotypes of a mutant

thsi is a pseudogene in B. subtilis 168

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: manganese catalase family (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• Swiss prot entry: O05513

• KEGG entry: [3]

• E.C. number:

Expression and regulation

• Operon: ydhU PubMed

• Expression browser: ydhU/1 PubMed

• Sigma factor:

• Regulation: induced by iron starvation (Fur) PubMed

• Regulatory mechanism: Fur: transcription repression PubMed

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Noel Baichoo, Tao Wang, Rick Ye, John D Helmann
Global analysis of the Bacillus subtilis Fur regulon and the iron starvation stimulon.
Mol Microbiol: 2002, 45(6);1613-29
[PubMed:12354229] [WorldCat.org] [DOI] (P p)