YdaK

• Description: general stress protein, may act as c-di-GMP receptor
  
  

Gene name	ydaK
Synonyms
Essential	no
Product	general stress protein
Function	unknown
Gene expression levels in SubtiExpress: ydaK
MW, pI	32 kDa, 6.695
Gene length, protein length	849 bp, 283 aa
Immediate neighbours	ydaJ, ydaL
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

general stress proteins (controlled by SigB)

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

• Locus tag: BSU04280

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:
  • contains a C-terminal degenerated GGDEF domain PubMed

• Modification:

• Cofactor(s):
  • binds c-di-GPM at high concentration (K(D) for c-di-GMP: 1.1 myM) PubMed

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: P96585

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon: ydaJ-ydaK-ydaL-ydaM-ydaN PubMed

• Expression browser: ydaK PubMed

• Sigma factor: SigB PubMed

• Regulation:
  • expressed during stress (SigB) PubMed

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant: GP1592 (kan) available in Stülke lab

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody: