Difference between revisions of "SigE"
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| − | * '''Description:''' RNA polymerase sporulation mother cell-specific (early) sigma factor SigE <br/><br/> | + | * '''Description:''' RNA polymerase sporulation mother cell-specific (early) [[sigma factor]] SigE <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 10: | Line 10: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || RNA polymerase sporulation mother cell-specific (early) sigma factor SigE | + | |style="background:#ABCDEF;" align="center"| '''Product''' || RNA polymerase sporulation mother cell-specific (early) [[sigma factor]] SigE |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || transcription of sporulation genes (early mother cell) | |style="background:#ABCDEF;" align="center"|'''Function''' || transcription of sporulation genes (early mother cell) | ||
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=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
| − | * '''Catalyzed reaction/ biological activity:''' RNA polymerase sigma factor, active in the mother cell | + | * '''Catalyzed reaction/ biological activity:''' RNA polymerase [[sigma factor]], active in the mother cell |
* '''Protein family:''' | * '''Protein family:''' | ||
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* '''Operon:''' ''[[spoIIGA]]-[[sigE]]-[[sigG]]'' | * '''Operon:''' ''[[spoIIGA]]-[[sigE]]-[[sigG]]'' | ||
| − | * '''Sigma factor:''' [[SigA]] | + | * '''[[Sigma factor]]:''' [[SigA]] |
* '''Regulation:''' expressed early during sporulation ([[Spo0A]]) | * '''Regulation:''' expressed early during sporulation ([[Spo0A]]) | ||
Revision as of 17:07, 7 April 2009
- Description: RNA polymerase sporulation mother cell-specific (early) sigma factor SigE
| Gene name | sigE |
| Synonyms | spoIIGB |
| Essential | no |
| Product | RNA polymerase sporulation mother cell-specific (early) sigma factor SigE |
| Function | transcription of sporulation genes (early mother cell) |
| MW, pI | 27 kDa, 9.212 |
| Gene length, protein length | 717 bp, 239 aa |
| Immediate neighbours | spoIIGA, sigG |
| Gene sequence (+200bp) | Protein sequence |
| Caution: The sequence for this gene in SubtiList contains errors | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: RNA polymerase sigma factor, active in the mother cell
- Protein family:
- Paralogous protein(s):
Genes controlled by SigE
dacB, pbpI, spoVD, phoB-ydhF, asnO, bdbD-bdbC, bofA, cotE, ctaE, yaaH, ybaK-cwlD
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- Swiss prot entry:
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation: expressed early during sporulation (Spo0A)
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
