Difference between revisions of "RocE"

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(Expression and regulation)
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* '''Sigma factor:''' [[SigL]] [http://www.ncbi.nlm.nih.gov/sites/entrez/7540694 PubMed]  
 
* '''Sigma factor:''' [[SigL]] [http://www.ncbi.nlm.nih.gov/sites/entrez/7540694 PubMed]  
  
* '''Regulation:'''  
+
* '''Regulation:''' induced by arginine ([[RocR]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/7540694 PubMed]
  
* '''Regulatory mechanism:'''  
+
* '''Regulatory mechanism:''' [[RocR]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/7540694 PubMed]
  
 
* '''Additional information:'''
 
* '''Additional information:'''

Revision as of 18:55, 18 March 2009

  • Description: amino acid permease

Gene name rocE
Synonyms
Essential no
Product amino acid permease
Function arginine, ornithine and citrulline uptake
MW, pI 51 kDa, 8.528
Gene length, protein length 1401 bp, 467 aa
Immediate neighbours rocF, rocD
Gene sequence (+200bp) Protein sequence
Genetic context
RocE context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism: RocR: transcription activation PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Gardan R, Rapoport G, Débarbouillé M. (1995) Expression of the rocDEF operon involved in arginine catabolism in Bacillus subtilis. J Mol Biol. Jun 23;249(5): 843-56. PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed