Difference between revisions of "ComFB"
| Line 79: | Line 79: | ||
* '''[[Cofactors]]:''' | * '''[[Cofactors]]:''' | ||
| + | ** Zn {{PubMed|25423369}} | ||
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| Line 85: | Line 86: | ||
* '''[[Localization]]:''' | * '''[[Localization]]:''' | ||
| + | ** forms dimers {{PubMed|25423369}} | ||
| + | ** cytoplasma {{PubMed|25423369}} | ||
** localizes to one or both cell poles {{PubMed|21278288}} | ** localizes to one or both cell poles {{PubMed|21278288}} | ||
| + | |||
=== Database entries === | === Database entries === | ||
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU35460&redirect=T BSU35460] | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU35460&redirect=T BSU35460] | ||
| − | * '''Structure:''' | + | * '''Structure:''' [http://pdb.org/pdb/search/structidSearch.do?structureId=4WAI 4WAI] {{PubMed|25423369}} |
* '''UniProt:''' [http://www.uniprot.org/uniprot/P39146 P39146] | * '''UniProt:''' [http://www.uniprot.org/uniprot/P39146 P39146] | ||
| Line 134: | Line 138: | ||
=References= | =References= | ||
| − | <pubmed>11814663,8412657,21278288, </pubmed> | + | <pubmed>11814663,8412657,21278288, 25423369 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 10:23, 26 November 2014
- Description: late competence gene
| Gene name | comFB |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | compentence |
| Gene expression levels in SubtiExpress: comFB | |
| MW, pI | 10 kDa, 4.827 |
| Gene length, protein length | 294 bp, 98 aa |
| Immediate neighbours | comFC, comFA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU35460
Phenotypes of a mutant
Database entries
- BsubCyc: BSU35460
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
Database entries
- BsubCyc: BSU35460
- UniProt: P39146
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Tatyana A Sysoeva, Lukas B Bane, Daphne Y Xiao, Baundauna Bose, Scott S Chilton, Rachelle Gaudet, Briana M Burton
Structural characterization of the late competence protein ComFB from Bacillus subtilis.
Biosci Rep: 2015, 35(2);
[PubMed:25423369]
[WorldCat.org]
[DOI]
(I e)
Miriam Kaufenstein, Martin van der Laan, Peter L Graumann
The three-layered DNA uptake machinery at the cell pole in competent Bacillus subtilis cells is a stable complex.
J Bacteriol: 2011, 193(7);1633-42
[PubMed:21278288]
[WorldCat.org]
[DOI]
(I p)
Hanne Jarmer, Randy Berka, Steen Knudsen, Hans H Saxild
Transcriptome analysis documents induced competence of Bacillus subtilis during nitrogen limiting conditions.
FEMS Microbiol Lett: 2002, 206(2);197-200
[PubMed:11814663]
[WorldCat.org]
[DOI]
(P p)
J A Londoño-Vallejo, D Dubnau
comF, a Bacillus subtilis late competence locus, encodes a protein similar to ATP-dependent RNA/DNA helicases.
Mol Microbiol: 1993, 9(1);119-31
[PubMed:8412657]
[WorldCat.org]
[DOI]
(P p)
