Difference between revisions of "CoaA"

From SubtiWiki
Jump to: navigation, search
Line 58: Line 58:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU23760&redirect=T BSU23760]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yqjPQ-dsdA-coaA-yqjT.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yqjPQ-dsdA-coaA-yqjT.html]
Line 95: Line 96:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU23760&redirect=T BSU23760]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1SQ5 1SQ5] (from ''Escherichia coli'', 49% identity, 67% similarity) {{PubMed|15136582}}
 
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1SQ5 1SQ5] (from ''Escherichia coli'', 49% identity, 67% similarity) {{PubMed|15136582}}

Revision as of 14:08, 2 April 2014

  • Description: probable pantothenate kinase

Gene name coaA
Synonyms yqjS
Essential no
Product probable pantothenate kinase
Function biosynthesis of coenzyme A
Gene expression levels in SubtiExpress: coaA
Metabolic function and regulation of this protein in SubtiPathways:
coaA
MW, pI 36 kDa, 5.894
Gene length, protein length 957 bp, 319 aa
Immediate neighbours yqjT, dsdA
Sequences Protein DNA DNA_with_flanks
Genetic context
CoaA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CoaA expression.png




























Categories containing this gene/protein

biosynthesis of cofactors

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU23760

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + (R)-pantothenate = ADP + (R)-4'-phosphopantothenate (according to Swiss-Prot)
  • Protein family: prokaryotic pantothenate kinase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1SQ5 (from Escherichia coli, 49% identity, 67% similarity) PubMed
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References