Difference between revisions of "HemE"
(→References) |
|||
| Line 55: | Line 55: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU10120&redirect=T BSU10120] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/hemEHY.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/hemEHY.html] | ||
| Line 93: | Line 94: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU10120&redirect=T BSU10120] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2INF 2INF] | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2INF 2INF] | ||
Revision as of 13:20, 2 April 2014
- Description: uroporphyrinogen decarboxylase (uroporphyrinogen III)
| Gene name | hemE |
| Synonyms | |
| Essential | no |
| Product | uroporphyrinogen decarboxylase (uroporphyrinogen III) |
| Function | heme biosynthesis |
| Gene expression levels in SubtiExpress: hemE | |
| MW, pI | 39 kDa, 5.262 |
| Gene length, protein length | 1059 bp, 353 aa |
| Immediate neighbours | pbpF, hemH |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU10120
Phenotypes of a mutant
Database entries
- BsubCyc: BSU10120
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Uroporphyrinogen III = coproporphyrinogen + 4 CO2 (according to Swiss-Prot)
- Protein family: uroporphyrinogen decarboxylase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- BsubCyc: BSU10120
- Structure: 2INF
- UniProt: P32395
- KEGG entry: [3]
- E.C. number: 4.1.1.37
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Jun Fan, Qun Liu, Quan Hao, Maikun Teng, Liwen Niu
Crystal structure of uroporphyrinogen decarboxylase from Bacillus subtilis.
J Bacteriol: 2007, 189(9);3573-80
[PubMed:17122346]
[WorldCat.org]
[DOI]
(P p)
M Hansson, L Hederstedt
Cloning and characterization of the Bacillus subtilis hemEHY gene cluster, which encodes protoheme IX biosynthetic enzymes.
J Bacteriol: 1992, 174(24);8081-93
[PubMed:1459957]
[WorldCat.org]
[DOI]
(P p)
