Difference between revisions of "YdaK"

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===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
* not available, the ''[[ydaJ]]-[[ydaK]]-[[ydaL]]-[[ydaM]]-[[ydaN]]'' operon may be essential {{PubMed|22821967}}
 
  
 
=== Database entries ===
 
=== Database entries ===

Revision as of 09:35, 19 June 2013

* Description: general stress protein, potential diguanylate cyclase

Gene name ydaK
Synonyms
Essential no
Product potential diguanylate cyclase
Function unknown
Gene expression levels in SubtiExpress: ydaK
MW, pI 32 kDa, 6.695
Gene length, protein length 849 bp, 283 aa
Immediate neighbours ydaJ, ydaL
Sequences Protein DNA DNA_with_flanks
Genetic context
YdaK context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdaK expression.png















Categories containing this gene/protein

general stress proteins (controlled by SigB), metabolism of signalling nucleotides

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU04280

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
    • contains a C-terminal GGDEF domain PubMed
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References