Difference between revisions of "AraP"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[araQ]]'', ''[[araN]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[araQ]]'', ''[[araN]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU28740 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU28740 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU28740 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU28740 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU28740 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU28740 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:araP_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:araP_context.gif]]

Revision as of 10:57, 14 May 2013

Gene name araP
Synonyms yseD
Essential no
Product L-arabinose ABC transporter (integral membrane protein))
Function uptake of arabinose
Gene expression levels in SubtiExpress: araP
Interactions involving this protein in SubtInteract: AraP
Metabolic function and regulation of this protein in SubtiPathways:
Sugar catabolism
MW, pI 34 kDa, 9.69
Gene length, protein length 939 bp, 313 aa
Immediate neighbours araQ, araN
Sequences Protein DNA DNA_with_flanks
Genetic context
AraP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AraP expression.png




























Categories containing this gene/protein

ABC transporters, utilization of specific carbon sources, membrane proteins

This gene is a member of the following regulons

AraR regulon, CcpA regulon

The gene

Basic information

  • Locus tag: BSU28740

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: MalFG subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Additional information: the mRNA is very stable (half-life > 15 min) PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed