Difference between revisions of "RibC"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[truB]]'', ''[[rpsO]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[truB]]'', ''[[rpsO]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16670 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16670 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16670 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16670 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16670 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16670 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:ribC_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ribC_context.gif]]

Revision as of 10:16, 14 May 2013

  • Description: riboflavin kinase / FAD synthase

Gene name ribC
Synonyms
Essential yes PubMed
Product riboflavin kinase / FAD synthase
Function FAD biosynthesis
Gene expression levels in SubtiExpress: ribC
Metabolic function and regulation of this protein in SubtiPathways:
Riboflavin / FAD
MW, pI 35 kDa, 8.3
Gene length, protein length 948 bp, 316 aa
Immediate neighbours truB, rpsO
Sequences Protein DNA DNA_with_flanks
Genetic context
RibC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RibC expression.png















Categories containing this gene/protein

biosynthesis of cofactors, essential genes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU16670

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + riboflavin = ADP + FMN (according to Swiss-Prot)
  • Protein family: ribF family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1S4M (from Thermotoga maritima, 33% identity, 54% similarity) PubMed
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

Weiru Wang, Rosalind Kim, Hisao Yokota, Sung-Hou Kim
Crystal structure of flavin binding to FAD synthetase of Thermotoga maritima.
Proteins: 2005, 58(1);246-8
[PubMed:15468322] [WorldCat.org] [DOI] (I p)