Difference between revisions of "SpoIID"
| Line 14: | Line 14: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || dissolution of the septal cell wall | |style="background:#ABCDEF;" align="center"|'''Function''' || dissolution of the septal cell wall | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU36750 spoIID] |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/SpoIID SpoIID] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/SpoIID SpoIID] | ||
| Line 24: | Line 24: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ywmC]]'', ''[[murAA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ywmC]]'', ''[[murAA]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU36750 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU36750 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU36750 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:spoIID_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:spoIID_context.gif]] | ||
Revision as of 14:04, 13 May 2013
- Description: cell wall hydrolase (lytic transglycosylase), required for complete dissolution of the asymmetric septum
| Gene name | spoIID |
| Synonyms | spoIIC |
| Essential | no |
| Product | lytic transglycosylase |
| Function | dissolution of the septal cell wall |
| Gene expression levels in SubtiExpress: spoIID | |
| Interactions involving this protein in SubtInteract: SpoIID | |
| MW, pI | 37 kDa, 9.764 |
| Gene length, protein length | 1029 bp, 343 aa |
| Immediate neighbours | ywmC, murAA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
cell wall/ other, sporulation proteins, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU36750
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: degrades the glycan strands of the peptidoglycan into disaccharide units PubMed, enhances SpoIIP activity PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane PubMed
Database entries
- Structure:
- UniProt: P07372
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: spoIID PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
